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. 2013 Jun 22;36(2):252–264. doi: 10.1590/S1415-47572013000200016

Table 1.

Distribution of partially identified 16S rDNA sequences detected in endophytic isolates from ‘Prata Anã’ banana tree roots.

Isolates E-value1 Identity2 Most closely related organism3 Gram test nifH gene GenBank accession no.4
EB-01 0.0 98% Bacillus pumilus + - HM006706.1
EB-04 0.0 98% Bacillus subtilis + + AY741264.1
EB-05 7.e−119 99% Bacillus pumilus + - HQ218993.1
EB-07 0.0 98% Agrobacterium tumefaciens - - GU784794.1
EB-09 1.e−116 98% Bacillus subtilis + - AY741264.1
EB-10 1.e−136 98% Bacillus pumilus + - GQ917222.1
EB-11 5.e−172 97% Bacillus sp. + - HQ218993.1
EB-12 4.e−116 98% Bacillus pumilus + - GQ917222.1
EB-14 0.0 99% Bacillus pumilus + - HQ218993.1
EB-15 4.e−127 98% Bacillus pumilus + - GQ917222.1
EB-16 4.e−111 97% Bacillus sp. + - AJ550463.1
EB-17 2.e−109 97% Bacillus sp. + - JF802184.1
EB-23 3.e−179 98% Klebsiella pneumoniae - + JN201948.1
EB-24 0.0 98% Bacillus thuringiensis + + JF947357.1
EB-25 0.0 98% Bacillus cereus + + GU451184.1
EB-26 0.0 98% Bacillus methylotrophicus + - HM209756.1
EB-27 0.0 97% Bacillus sp. + - HQ256520.1
EB-28 1.e−163 96% Paenibacillus sp. + + EF178460.1
EB-30 0.0 98% Bacillus axarquienses + - JF414764.1
EB-34 1.e−131 98% Bacillus pumilus + - JN215511.1
EB-35 2.e−88 94% Bacillus sp. + - GQ340516.1
EB-37 2.e−146 96% Bacillus sp. + - JN215502.1
EB-38 3.e−97 96% Bacillus sp. - + EU931559.1
EB-40 7.e−99 97% Bacillus sp. + + GQ340516.1
EB-42 2.e−89 96% Bacillus sp. + - JN082266.1
EB-44 4.e −173 98% Bacillus amyloliquefaciens + - GU122948.1
EB-45 0.0 98% Lysinibacillus sp. + + JN215512.1
EB-46 0.0 99% Bacillus pumilus + - FJ236809.1
EB-47 1.e−147 97% Bacillus sp. + + FJ611939.1
EB-48 0.0 98% Bacillus subtilis + - AY741264.1
EB-49 0.0 98% Bacillus licheniformis + + EU366371.1
EB-50 3.e−108 96% Bacillus sp. + + HM769816.1
EB-51 0.0 98% Bacillus pumilus + + HQ218993.1
EB-52 3.e−133 96% Bacillus sp. + - JF313264.1
EB-53 7.e−85 92% Lysinibacillussp. + - JN215512.1
EB-55 3.e−108 98% Bacillus subtilis + - HQ334981.1
EB-56 2.e−89 92% Bacillus sp. + + GU269573.1
EB-57 3.e−102 96% Bacillus safensis + - JN092810.1
EB-58 9.e−139 98% Bacillus pumilus + - JN082265.1
EB-60 1.e−112 96% Lysinibacillussp. + - JF906500.1
EB-62 5.e−105 97% Bacillus sp. + - HQ334981.1
EB-63 3.e−108 98% Bacillus pumilus + - GQ917222.1
EB-64 0.0 98% Bacillus pumilus + + JF271873.1
EB-65 7.e−171 97% Bacillus sp. + - EU366378.1
EB-68 2.e−136 98% Bacillus safensis + - JN092818.1
EB-69 6.e−95 97% Bacillus sp. + - GQ34O516.1
EB-70 5.e−167 96% Bacillus sp. + - GQ340516.1
EB-71 2.e−166 97% Bacillus sp. + + HM461161.1
EB-73 4.e−117 99% Bacillus pumilus + - GQ917222.1
EB-76 7.e−130 97% Bacillus sp. + - FJ937920.1
EB-84 0.0 98% Bacillus subtilis + - HQ334981.1
EB-87 8.e−155 98% Bacillus tequilensis + + HM770882.1
EB-88 3.e−175 98% Bacillus flexus + + DQ870687.1
EB-89 2.e−177 98% Bacillus subtilis + - HQ234331.1
EB-91 6.e−100 97% Bacillus sp. + - JN092818.1
EB-98 6.e−125 98% Micrococcus luteus + - FJ380958.1
EB-99 2.e−136 96% Bacillus sp. + - AB301022.1
EB-101 2.e−95 98% Bacillus pumilus + - JN082266.1
EB-107 0.0 99% Bacillus thuringiensis + - AM292316.1
EB-108 2.e−84 95% Rhizobium sp. - - AY693664.1
EB-111 8.e−114 99% Bacillus megaterium + - AM237398.1
EB-113 9.e−120 92% Bacillus sp. + - JN208198.1
EB-117 4.e−91 97% Bacillus sp. + - JN082257.1
EB-120 6.e−131 97% Bacillus sp. + - AM921636.1
EB-124 1.e−55 93% Bacillus sp. + - EU977719.1
EB-125 4.e−137 98% Bacillus pumilus + - HQ858063.1
EB-126 0.0 98% Bacillus subtilis + + HM769817.1
EB-127 2.e−89 97% Sporolactobacillus sp. + + D16282.1
EB-128 0.0 99% Bacillus pumilus + - EU379285.1
EB-129 1.e−137 95% Bacillus sp. + - HM461228.1
EB-132 3.e−149 98% Bacillus subtilis + - AY741264.1
EB-133 1.e−171 98% Bacillus amyloliquefaciens + + AB301022.1
EB-134 6.e−74 98% Bacillus amyloliquefaciens + - AB301022.1
EB-135 2.e−104 98% Bacillus pumilus + - EU977790.1
EB-136 2.e−135 98% Bacillus subtilis + + AB301012.1
EB-140 1.e−92 94% Bacillus sp. + - GQ340516.1
EB-141 1.e−122 96% Lysinibacillus sp. + - GU172164.1
EB-143 8.e−94 96% Bacillus sp. + - JN092818.1
EB-144 0.0 92% Paenibacillus sp. + + EF178460.1
EB-145 0.0 94% Bacillus sp. + - JF896450.1
EB-146 0.0 96% Bacillus sp. + - HM461161.1
EB-147 0.0 99% Bacillus subtilis + - EU977724.1
EB-148 0.0 97% Aneurinibacillus sp. + - AB112723.1
EB-149 2.e−145 97% Bacillus sp. + - EU977790.1
EB-150 6.e−121 92% Bacillus sp. + - DQ915582.1
EB-151 2.e−157 95% Bacillus sp. + - AM237389.1
EB-152 1.e−118 95% Bacillus sp. + - JN082257.1
EB-153 1.e−127 95% Bacillus sp. + - HM461228.1
EB-154 8.e−104 98% Bacillus pumilus + - HQ334985.1
EB-157 1.e−122 95% Bacillus sp. + - JN092818.1
EB-158 2.e−99 97% Bacillus sp. + - AJ842964.1
EB-161 1.e−96 96% Bacillus sp. + - HM461161.1
EB-162 3.e−107 100% Bacillus pumilus + - GQ917222.1
EB-164 1.e−142 96% Bacillus sp. + - AY484507.1
EB-169 5.e−106 98% Bacillus pumilus + + FJ189791.1
EB-182 0.0 95% Bacillus sp. + - HG003422.1
EB-184 0.0 96% Bacillus sp. + - HQ218993.1
EB-187 2.e−94 95% Bacillus sp. + - FM865689.1
EB-194 2.e−110 93% Bacillus sp. - + FJ405377.1
EB-196 5.e−91 95% Enterobacter sp. - - GQ260081.1
EB-199 1.e−92 95% Bacillus sp. + - EF522800.1
EB-200 3.e−97 99% Bacillus pumilus + - EU977790.1
1

Probability of randomly finding the same alignment between two sequences.

2

Percentage of sequence identity between the sequence of a banana isolate and a related organism.

3

Organism with the partial 16S rDNA sequence most homologous to that of the banana isolate.

4

Accession number of the related organism sequence.