Table 5.

Number of differentially bound regions at 5% FDR when making an assumption of the same number of binding sites for the two proteins (p₁ = p₂), compared to the case when this assumption is not made (p₁ ≠ p₂); the last column reports the difference in the BIC values of the two models (a positive difference means a better fit for the model that assumes p₁ = p₂)

Conditions	# Regions bound only by CBP		# Regions bound only by p300		BIC difference
	p1 ≠ p2	p1 = p2	p1 ≠ p2	p1 = p2	BIC${}_{p_1\ne p_2}$ - BIC${}_{p_1=p_2}$
T0	9	11	2726	1277	16172.34
Wang	3069	2630	142	142	3267.04