Table 3. Candidate target genes of miR-218 in the focal adhesion pathway.
Gene symbol | Log2 ratio (miR-218/miR-control) | Putative miR-218 target site | |||
---|---|---|---|---|---|
FaDu | SAS | Average | miR Walk | Target Scan | |
CAV2 | −1.97 | −1.73 | −1.85 | + | + |
PPP1CB | −1.98 | −1.65 | −1.82 | + | + |
LAMC2 | −1.51 | −0.96 | −1.24 | − | − |
ACTN1 | −1.13 | −1.27 | −1.20 | + | + |
THBS2 | −0.60 | −1.61 | −1.11 | − | − |
LAMB3 | −1.25 | −0.90 | −1.08 | + | + |
CAV1 | −1.20 | −0.95 | −1.08 | − | − |
EGFR | −0.85 | −1.19 | −1.02 | + | + |
VEGFC | −0.90 | −1.03 | −0.97 | − | − |
PPP1CC | −0.87 | −0.97 | −0.92 | + | + |
COL5A2 | 0.93 | −2.66 | −0.87 | − | − |
CCND2 | −1.06 | −0.62 | −0.84 | − | + |
VASP | −0.82 | −0.72 | −0.77 | − | − |
CAV3 | −0.87 | −0.66 | −0.77 | + | + |
THBS1 | −0.66 | −0.86 | −0.76 | + | + |
COL4A2 | −0.72 | −0.58 | −0.65 | − | − |
ACTN4 | −0.69 | −0.57 | −0.63 | + | + |
ITGA3 | −0.69 | −0.53 | −0.61 | − | − |
CCND3 | −0.76 | −0.37 | −0.57 | + | + |
SHC1 | −0.64 | −0.45 | −0.55 | + | + |
ITGB4 | −0.61 | −0.43 | −0.52 | − | + |
PXN | −0.67 | −0.33 | −0.50 | + | + |
LAMC1 | −0.59 | −0.35 | −0.47 | + | + |
VEGFA | −0.19 | −0.63 | −0.41 | − | − |
ERBB2 | −0.06 | −0.62 | −0.34 | − | − |
LAMA3 | −0.76 | 0.08 | −0.34 | − | − |
FN1 | −0.11 | −0.54 | −0.33 | − | + |
MAPK1 | −0.55 | −0.09 | −0.32 | − | − |
FLNB | −0.63 | 0.30 | −0.17 | − | − |