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Correlation between RNA-seq and qRT-PCR expression data. (A) Plot of the relative fold-change in gene expression of 16 porcine genes from infected enterocytes by RNA-seq (x-axis) and qRT-PCR (y-axis). R2 = 0.92 (p<0.05). (B) Plot of the relative quantification of ten L. intracellularis genes by RNA-seq (x-axis) and the transcript levels generated by qRT-PCR (y-axis). R2 = 0.81 (p<0.05).
