Table 1.
The top 20 highly expressed genes by L. intracellularis in the enterocyte cytoplasm
| Locus | Gene product | Predicted function | Log2 (RPKM) |
|---|---|---|---|
| LI0461 |
Hypothetical protein |
Unknown |
15.0 |
| LI0625 |
Chaperonin GroEL |
Protein folding |
14.9 |
| LI1159 |
Hypothetical protein |
Unknown |
13.7 |
| LI0447 |
Hypothetical protein |
Unknown |
13.6 |
| LI0935 |
Elongation factor Tu (tufA) |
Protein biosynthesis |
13.5 |
| LI0624 |
Co-chaperonin GroES |
Protein folding |
13.5 |
| LI0005 |
Cu-Zn superoxide dismutase precursor (sodC) |
Oxidative stress |
13.3 |
| LIC060 |
Hypothetical protein |
Unknown |
12.9 |
| LI0267 |
Hypothetical protein |
Unknown |
12.8 |
| LI1075 |
Dioxygenases related to 2-nitropropane dioxygenase |
Oxidative stress |
12.7 |
| LI0809 |
Hypothetical protein |
Unknown |
12.5 |
| LI0912 |
Molecular chaperone DnaK |
Protein folding |
12.4 |
| LI0439 |
Hydrogenase-1 small subunit |
Cell metabolism |
12.4 |
| LI0902 |
Outer membrane protein related to OmpA-OmpF porin |
Membrane transport |
12.4 |
| LI1158 |
Hypothetical protein related to secretion system effector C |
Intracellular survival |
12.3 |
| LI1005 |
Pseudouridine synthase (truB) |
Protein biosynthesis |
12.2 |
| LI0559 |
50S ribosomal protein L13 |
Protein biosynthesis |
12.2 |
| LI0697 |
Rubrerythrin (rubY) |
Oxidative stress |
12.2 |
| LI0043 |
Hypothetical protein |
Unknown |
12.0 |
| LIC103 | Methyl-accepting chemotaxis protein (pilJ) | Chemotaxis | 11.9 |