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. 2013 Jul 15;13:16.

Table 1.

Mapping of the PASD1 epitopes, wild-type Pw4-Pw10, and analogues Pa11–Pa16.

Name Nonamer sequence SYFPEITHI score a.a. location Wild-type peptide derived from
Wild type peptides Pw4 LQNPRDVSV 9 587–595
Pw5 VVQVNTWSC 9 703–711
Pw6 YQPDQMRSA 9 748–756
Pw7 IVGNERVQI 16 577–585
Pw8 RLWQELSDS 15 691–699
Pw9 KLQERKKWQ 12 542–550
Pw10 QQLREQRKV 14 501–509
Peptide analogues Pa11 LINPRDVSV 25 587–595 Pw4
Pa12 LVNPRDVSV 25 587–595 Pw4
Pal3 RLWQELSDV 22 691–699 Pw8
Pa14 RLWQELSDI 23 691–699 Pw8
Pa15 RLWQELSDL 27 691–699 Pw8
Pa16 KLQERKKWV 27 542–550 Pw9

Modified anchor residue underlined.