Skip to main content
. 2013 Jul 22;8(7):e69026. doi: 10.1371/journal.pone.0069026

Table 1. Genetic events detected in the peripheral blood of ISKS probands.

Case Genetic variant TP53 Amino acid change Mutation type Condel23,24 Reported somatic cases22 * Reported germline cases22 * Mutant allele present in tumour Heterozygosity in tumour Pathogenic
Putative germline
1 c.72del p.Lys24AsnfsX20 frameshift NA 0 0 yes LOH yes
2 c.586C>T p.Arg196X nonsense NA 241 13 yes LOH yes
3 c.559+1G>T exon skipping splice site NA 10 0 yes LOH yes
4 c.329G>C p.Arg110Pro missense del 15 0 yes LOH putative
5 c.783-1G>A exon skipping splice site NA 7 0 yes No LOH yes
6 c.700T>C p.Tyr234His missense del 33 0 yes LOH putative
7 c.853G>A p.Glu285Lys missense del 186 5 yes LOH yes
8 c.997C>T p.Arg333Cys missense del 0 0 yes unknown putative
9 c.473G>A p.Arg158His missense del 113 9 yes LOH yes
10 c.877G>T p.Gly293Trp missense del 6 2 yes LOH yes
11 c.847C>T p.Arg283Cys missense del 29 10 yes No LOH yes
12 c.586C>T p.Arg196X nonsense NA 241 13 yes No LOH yes
13 c.826_840del p.Ala276_Arg280del frameshift NA 1 0 unknown unknown yes
14 c.843C>A p.Asp281Glu missense del 28 0 yes No LOH putative
15 c.841G>A p.Asp281Asn missense del 37 4 yes No LOH yes
16 c.469G>A p.Val157Ile missense del/neut 19 0 yes No LOH putative
17 c.835G>A p.Gly279Arg missense del 8 0 yes No LOH putative
Putative somatic
18 c.532C>G p.His178Asp missense del 9 0 yes LOH yes
19 whole gene del - deletion NA 0 1 - - yes
20 whole gene del - deletion NA 0 1 - - yes
*

Database version R16 November, 2012; del: deleterious; neut: neutral; FS: frame shift; LOH: loss of heterozygosity; NA: not applicable. The assignment of pathogenicity was performed as outlined in supplementary Figure 3.