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. 2013 Jul 5;3:36. doi: 10.1186/2191-0855-3-36

Table 1.

PCR primers used and virulence factors (adapted from Matarante et al.2004)

Target gene Primer name Primer sequence (5′-3′) Amplicon size (bp) Reference
hbl – D/A
hblD-f
GGAGCGGTCGTTATTGTTGT
623
(Matarante et al. 2004)
hblA-r
GCCGTATCTCCATTGTTCGT
nheB
nheB 1500 S
CTATCAGCACTTATGGCAG
769
(Matarante et al. 2004)
nhe B 2269 A
ACTCCTAGCGGTGTTCC
bceT
ETF
TTACATTACCAGGACGTGCTT
428
(Matarante et al. 2004)
ETR
TGTTTGTGATTGTAATTCAGG
entFM
EntA
ATGAAAAAAGTAATTTGCAGG
1269
(Matarante et al. 2004)
EntB
TTAGTATGCTTTTGTGTAACC
sph
Ph1
CGTGCCGATTTAATTGGGGC
558
(Matarante et al. 2004)
Ph2
CAATGTTTTAAACATGGATGCG
piplc
PC105
CGCTATCAATGGACCATGG
569
(Matarante et al. 2004)
PC106
GGACTATTCCATGCTGTACC
pfkA* pfkA-F
CCATCAGCTAAACCAGCC
370 This study
pfkA-R CGCGGTGGTACGAAATTA

* pfkA primer was designed using the NCBI Primer-Blast.