Skip to main content
. 2013 Jul 23;8(7):e68878. doi: 10.1371/journal.pone.0068878

Table 1. WGCNA Network Summary.

Whole Brain Cerebe llum Hippo campus Nucleus Accumbens Prefrontal Cortex Striatum Ventral Tegmental Area
Number of BXD RI Strains On Which Network is Based 30 28 67 34 27 31 35
Number of Probesets Placed Into Modules 28,867 26,109 18,949 16,632 19,288 21,687 20,550
Number of Modules Identified 499 604 337 512 595 300 433
Minimum Module Size 5 5 5 5 5 5 5
Maximum Module Size 2,881 4,270 3,185 2,928 2,144 3,903 3,440
Median Module Size 9 8 8 9 8 9 9
Candidate Modules
Number of Modules Significantly1 Correlated with Alcohol Consumption 12 2 5 19 7 9 12
Modules Significantly Correlated with Alcohol Consumption and with mQTL/bQTL overlap (Candidate Modules) 4 1 1 8 4 1 5
Minimum Proportion of Variance in Candidate Module(s) Captured by Eigengene 91% 98% 99% 88% 82% 97% 83%
1

Significant association with alcohol consumption is defined as FDR <0.05 or Fisher's unadjusted p-value <0.01 for the association between module eigengene and alcohol consumption (Rodriguez et al., 1994; Phillips et al., 1994).