Table 4. Transcripts Significantly Correlated with Alcohol Consumption after Correction for cis-eQTL.

Module	Gene Symbol	Probeset	Rodriguez Correlation coefficient (p value)	Phillips Correlation coefficient (p value)	Fishers combined p-value
lightsteelblue1.pfc	Hyou1	1423291_s_at	0.89 (0.016)	0.92 (0.010)	0.002
honeydew.na	Hyou1	1423290_at	0.75 (0.089)	0.93 (0.008)	0.006
lightsteelblue1.pfc	Chpf2	1453846_at	0.91 (0.012)	0.68 (0.137)	0.012
rosybrown3.na	Arih1	1441022_at	−0.86 (0.030)	−0.63 (0.180)	0.033
rosybrown2.na	2310030G06Rik	1449357_at	−0.46 (0.354)	−0.89 (0.017)	0.038
mediumturquoise.vta	Lsm12	1427998_at	−0.87 (0.025)	−0.56 (0.249)	0.038
burlywood3.str	Rps15a	1457726_at	−0.51 (0.297)	−0.85 (0.033)	0.055
rosybrown3.na	Rcn2	1444248_at	−0.82 (0.045)	−0.59 (0.219)	0.056
honeydew.na	Fxyd2	1419378_a_at	−0.73 (0.097)	−0.73 (0.102)	0.056
lightsteelblue1.pfc	Alg9	1418844_at	−0.42 (0.401)	−0.84 (0.036)	0.075
rosybrown3.na	1700017B05Rik	1447063_at	0.52 (0.289)	0.81 (0.052)	0.078
lightsteelblue1.pfc	Ubash3b	1436805_at	0.69 (0.129)	0.71 (0.117)	0.079
tomato2.vta	Thumpd1	1436007_a_at	−0.80 (0.055)	−0.51 (0.296)	0.084
limegreen.na	Lsm12	1429509_at	0.73 (0.097)	0.64 (0.170)	0.084
lightsteelblue1.pfc	Sorl1	1460390_at	−0.64 (0.174)	−0.73 (0.096)	0.085
rosybrown3.na	Dis3l	1437737_at	−0.63 (0.176)	−0.71 (0.116)	0.100

Pearson semi-partial correlation coefficients were calculated between transcripts within meta-modules and the alcohol consumption phenotype, conditional on the most proximal marker to the genomic location of the individual probeset.