Table 1.

Summary of mapping results from exome sequencing, WGS and simulated exome sequencing

	Exome 1 (million)	Exome 2 (million)	Exome 3 (million)	WGS (million)	Simulation1 (million)	Simulation2 (million)	Simulation3 (million)
No. of total reads	201.4	195.1	194.2	1097.0	75.0	75.0	75.0
No. of reads uniquely mapped to either genome	171.9	167.0	166.1	921.1	74.9	74.9	74.9
No. of non-redundant reads mapped to the targets on either genome	53.4	52.4	51.8	21.3	58.8	58.8	58.8
No. of non-redundant reads mapped only to the targets from C57BL/6 J	19.0	18.7	18.5	7.1	20.0	20.0	20.0
No. of non-redundant reads mapped only to the targets from SPRET/EiJ	17.4	17.0	16.9	7.1	20.0	20.0	20.0