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. 2013 Jul 8;14:455. doi: 10.1186/1471-2164-14-455

Table 1.

Comparison of the proportion of known repeats in SD13M with the values for the entire genome and average values for SDs

Repeat Ratio in SD13M (%) Segmental duplication average (%) [18] Whole genome average (%) [18]
DNA
0.18
0.36
0.86
LINE
23.9
34.4
20.3
Low_complexity
0.82
0.58
0.79
LTR
18.3
19.5
10.2
Satellite (MMSAT4)
1.92
0.32
0.05
Simple_repeat
1.94
1.66
2.47
SINE
5.20
3.80
7.42
snRNA
0.00
0.01
0.01
tRNA
0.01
0.01
0.01
Unknown (MurSatRep)
5.97
0.54
0.05
Total 58.2 61.2 42.2