Skip to main content
. 2013 Jul 24;8(7):e69461. doi: 10.1371/journal.pone.0069461

Table 4. Differential Gene Ontology terms between contigs derived from Diet U and Diet S SSH cDNA libraries.

GO ID GO Term Category P-Value Diet U Diet S
GO:0006629 lipid metabolic process Up 0,004 25 12
GO:0009611 response to wounding Down 0,006 14 40
GO:0016887 ATPase activity Up 0,007 12 3
GO:0006643 membrane lipid metabolic process Up 0,007 6 0
GO:0050817 coagulation Down 0,009 10 31
GO:0042623 ATPase activity, coupled Up 0,012 11 3
GO:0006631 fatty acid metabolic process Up 0,013 8 1
GO:0050878 regulation of body fluid levels Down 0,014 10 30
GO:0042060 wound healing Down 0,014 10 30
GO:0009792 embryonic development ending in birth or egg hatching Down 0,016 1 11
GO:0043009 chordate embryonic development Down 0,016 1 11
GO:0006664 glycolipid metabolic process Up 0,016 5 0
GO:0006665 sphingolipid metabolic process Up 0,016 5 0
GO:0006687 glycosphingolipid metabolic process Up 0,016 5 0
GO:0005976 polysaccharide metabolic process Down 0,017 3 15
GO:0007596 blood coagulation Down 0,020 10 29
GO:0007599 hemostasis Down 0,020 10 29
GO:0019825 oxygen binding Down 0,020 0 7
GO:0031406 carboxylic acid binding Down 0,020 0 7
GO:0015669 gas transport Down 0,020 0 7
GO:0015671 oxygen transport Down 0,020 0 7
GO:0005344 oxygen transporter activity Down 0,020 0 7
GO:0008236 serine-type peptidase activity Down 0,028 12 31
GO:0017171 serine hydrolase activity Down 0,028 12 31
GO:0008233 peptidase activity Down 0,033 23 49
GO:0044255 cellular lipid metabolic process Up 0,035 16 8
GO:0020037 heme binding Down 0,035 9 26
GO:0048589 developmental growth Down 0,037 0 6
GO:0005515 protein binding Down 0,041 53 93
GO:0040007 growth Down 0,046 2 11

GO enrichment analysis between sequences generated form Diet U (forward subtracted library from the fish fed the unsupplementary diet) and Diet S (reverse subtracted library from the from the fish fed the supplementary diet) SSH libraries using Fisher's exact test with p≤0.05. Category Red: up-regulated in Diet U, Green: down-regulated in Diet U. The numbers of transcripts associated with a specific GO term in their respective libraries is provided.