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. 2013 Jul 24;8(7):e68946. doi: 10.1371/journal.pone.0068946

Table 5. GO term enriched actin-related genes whose expression responds to the switch from polar to apolar growth in PglaA-racAG18V.

Predicted protein function* Open reading frame code Up/Down Closest S. cerevisiae ortholog
Rho GDP dissociation inhibitor An18g04590 Rdi1
TORC2 and phosphoinositide PI4,5P(2) binding protein An11g02840 Slm2
Arp2/3 complex subunit An02g06360 Arc15
Arp2/3 complex subunit An01g05510 Arc35
Arp2/3 complex subunit An18g06590 Arc40
tropomyosin 1 An13g00760 Tpm1
actin cortical patch component An02g14620 Aip1
twinfilin An04g09020 Twf1
actin-capping protein An01g05290 Cap2
protein recruiting actin polymerization machinery An10g00370 Bzz1

Genes up-regulated are indicated with ↑. Differential gene expression was evaluated by moderated t-statistics using the Limma package [82] with a FDR threshold at 0.05 [83]. Fold changes and statistical significance is given in Additional file 1 and 2.

*

: Protein functions were predicted based on information inferred from the Saccharomyces genome data base SGD (http://www.yeastgenome.org/) and the Aspergillus genome database AspGD (http://www.aspergillusgenome.org/).