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. Author manuscript; available in PMC: 2013 Dec 1.
Published in final edited form as: Infect Genet Evol. 2012 Sep 13;12(8):1917–1925. doi: 10.1016/j.meegid.2012.08.022

Table 4.

Characterization of Mycobacterium tuberculosis (Mtb) clonal complexes (CC) found in San Diego County, 2005–2008.

CC ID # Mtb strains in CC # Unique genotypesa in CC Cluster size (min–max) Cluster size median
CC1 83 21 2–16 2
CC2 154 19 2–93 2
CC3 56 12 2–24 3
CC4 40 9 2–15 3
CC5 49 6 2–49 3
CC6 6 2 2–4 3
a

Genotypes defined by spoligotype and mycobacterial interspersed repetitive units (MIRU) typing.