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. 2013 Jul 25;8(7):e69598. doi: 10.1371/journal.pone.0069598

Table 1. Parameter values used in the model.

Parameter symbol value units reference
PMCA maximum flux Vp 7.5 μM/s this work
PMCA affinity Kp 1.5 μM 0.1–1 [59]
SOCE maximum flux Vs 1.57 μM/s this work
STIM SR Ca2+ affinity Ks 50 μM Inline graphicc* s/2
SOCE Hill exponent ns 4 [33]
SOCE timescale τs 30 s [32]
Constant leak influx α0 0 μM/s Inline graphic Vs
Cyt/SR vol. × buffer effects γ 5.405 [34], [60]
ROCE rate α1 0.00105 s−1 this work
SERCA maximum flux Ve 5 μM/s this work
SERCA affinity Ke 0.1 μM 0.1–1 [61]
CPA effect timescale τe 30 s ∼ min
IPR rate kIPR 0.667 s−1 this work
Agonist concentration Inline graphic 1 μM this work
Agonist effect timescale τp 30 s ∼ min
SR leak rate JSR 0.01 s−1 Inline graphic kIPR
RyR leak rate (Rya-Caf effect) KRYR 0.19 s−2 this work
Rya-Caf effect timescale τSR 10 s ∼ min
IPR affinity for Inline graphic K1 0.138 μM [34]
IPR affinity for Ca2+ (inhib. site) K2 1.05 μM [34]
IPR affinity for IP3 K3 0.943 μM [34]
IPR affinity for Ca2+ (inhib. site) K4 0.144 μM [34]
IPR affinity for Ca2+ (activ. site) K5 0.082 μM [34]
IPR Ca2+ dissoc. rate (inhib. site) k2 0.167 s−1 this work
IPR Ca2+ dissoc. rate (inhib. site) k4 0.138 k2 s−1 [34]

For Inline graphic and Inline graphic, the equilibrium Inline graphic concentrations are Inline graphicnM and Inline graphicM, which are in the physiological ranges [40], [41].