Table 1. Parameter values used in the model.
Parameter | symbol | value | units | reference |
PMCA maximum flux | Vp | 7.5 | μM/s | this work |
PMCA affinity | Kp | 1.5 | μM | 0.1–1 [59] |
SOCE maximum flux | Vs | 1.57 | μM/s | this work |
STIM SR Ca2+ affinity | Ks | 50 | μM | c* s/2 |
SOCE Hill exponent | ns | 4 | [33] | |
SOCE timescale | τs | 30 | s | [32] |
Constant leak influx | α0 | 0 | μM/s | Vs |
Cyt/SR vol. × buffer effects | γ | 5.405 | [34], [60] | |
ROCE rate | α1 | 0.00105 | s−1 | this work |
SERCA maximum flux | Ve | 5 | μM/s | this work |
SERCA affinity | Ke | 0.1 | μM | 0.1–1 [61] |
CPA effect timescale | τe | 30 | s | ∼ min |
IPR rate | kIPR | 0.667 | s−1 | this work |
Agonist concentration | 1 | μM | this work | |
Agonist effect timescale | τp | 30 | s | ∼ min |
SR leak rate | JSR | 0.01 | s−1 | kIPR |
RyR leak rate (Rya-Caf effect) | KRYR | 0.19 | s−2 | this work |
Rya-Caf effect timescale | τSR | 10 | s | ∼ min |
IPR affinity for | K1 | 0.138 | μM | [34] |
IPR affinity for Ca2+ (inhib. site) | K2 | 1.05 | μM | [34] |
IPR affinity for IP3 | K3 | 0.943 | μM | [34] |
IPR affinity for Ca2+ (inhib. site) | K4 | 0.144 | μM | [34] |
IPR affinity for Ca2+ (activ. site) | K5 | 0.082 | μM | [34] |
IPR Ca2+ dissoc. rate (inhib. site) | k−2 | 0.167 | s−1 | this work |
IPR Ca2+ dissoc. rate (inhib. site) | k−4 | 0.138 k−2 | s−1 | [34] |