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. 2013 Jul 26;8(7):e71019. doi: 10.1371/journal.pone.0071019

Table 1. Viruses used to determine analytical specificity of the triplex RT-PCR assay.

Virus Subgenotype/genotype Isolate
CSFV 1.1 Alfort 187
1.2 Brescia
1.3 Guatemala HC#4009
2.1 UK2000/7.1
2.2 SP399/96
2.3 Rostock
3.1 Congenital Tremor
3.3 CBR/93
3.4 Kanagawa
ASFV I Ang72*, Ba71V*, Ben 97/1, BF07*, CV97*, Dakar 59, E70*, E75*, Haiti*, HOLLAND 86, Lis 60, ORI 84, ORI 85, Ss88*,
II Grg 2007/8
III
IV
V Moz 64*, Moz 79, TEN 89/1
VI
VIII Lil 90/1, MwLil20/1*, DOWA, MAN 89/2
IX Ken06.B1*, Ken07.Eld1*, Uga 95/1, Ug03H*
X Bur 84/1, BUR 90/2
XVII ZIM 92/1
XXI RSA/1/96
Not determined CAM 1/87 P4, CAM 89/7, CON 2006/1, DEIGHTON, KAN B 89/2, KEF 89/2, KEF 89/9, MALTA MSF2A, MGR 1/2005, MVMT 90/1, NUR 86, SIY 92/1, UGA 95/2
BVDV I 1a C24V
BVDV II 2a 502643
BDV 1 S137/4
*

Samples obtained from Instituto Nacional de Investigacion in Madrid, Spain.

All other ASFV samples were obtained from The Pirbright Institute, UK.

All CSFV strains were obtained from AHVLA reference collection.