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. Author manuscript; available in PMC: 2013 Jul 27.
Published in final edited form as: Nat Chem. 2011 Oct 30;3(12):954–962. doi: 10.1038/nchem.1176

Figure 4. Accurate secondary structure models for non-coding RNAs.

Figure 4

a–f, Mutate-and-map Z-score data and resulting secondary structure models for the P4–P6 domain of the Tetrahymena group I ribozyme (a, b), the 5S ribosomal RNA from E. coli (c, d) and the domain that binds cyclic di-guanosine monophosphate from the V. cholerae VC1722 riboswitch (in the presence of 10 μM ligand; e, f). Colouring of squares (a, c, e) and lines and nucleotides (b, d, f) are as in Fig. 3.