Table 3.
Comparison of ratios derived from RNA-seq and from RT-PCR analysis for selective genes
| Gene ID | Description | RT-PCR ratio | RNA-Seq ratio |
|---|---|---|---|
|
sll0221 |
Bacterioferritin comigratory protein |
−1.18 |
−1.87 |
|
sll0248 |
Flavodoxin |
1.31 |
3.67 |
|
sll0629 |
Photosystem I reaction center subunit PsaK 2 |
1.05 |
1.11 |
|
sll1327 |
ATP synthase gamma chain |
1.29 |
1.10 |
|
sll1734 |
Hypothetical protein |
1.52 |
1.29 |
|
sll1796 |
Cytochrome c6 |
1.74 |
2.38 |
|
slr0288 |
Glutamate--ammonia ligase |
4.47 |
2.28 |
|
slr0952 |
Fructose-1,6-bisphosphatase class 1 |
−1.52 |
1.36 |
|
slr1828 |
Ferredoxin |
1.96 |
3.33 |
| slr1909 | NarL subfamily response regulator | 1.50 | 1.06 |