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. 2013 Jul 29;8(7):e70272. doi: 10.1371/journal.pone.0070272

Table 2. Relevant calculated populations and maximal contact lifetimes between linker and TI loop residues.

Model K252–X400 K252–X402 R253–X400 R253–X402 Y255–X400 Y255–F401
States (bound – unbound)
WT 49–451 202–298 497–3 431–69 0–500 460–40
NEUT 0–500 0–500 0–500 6–494 285–215 460–40
ALA 27–473 81–419 454–46 8–492 497–3 478–22
D400A 4–496 78–422 480–20 488–12 285–215 441–59
Maximal contact lifetime (ns)
WT 0.6 1.9 24.3 16.6 6.9
NEUT 0.2 4.1 13.8
ALA 1.0 4.3 8.9 0.3 24.5 12.4
D400A 0.1 2.0 17.3 21.9 7.7 7.5

Relation of connected and broken states (population) and maximal contact lifetimes for each interaction during the whole simulation of 50 ns are listed. For determining the population, the existence of a contact was checked in 100-ps-steps. Thus, the total number of possible states is 500. For the contact definition, a cut-off sphere of 3.5 Å is used. Beyond this value, a contact is defined as broken.