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. 2013 Jul 15;8(1):322. doi: 10.1186/1556-276X-8-322

Table 1.

Potential functions and parameters of united atom force field

Non-bond Bond Angle Torsion
Enb=4ϵσr12σr6,r<rc0,rrc

Eb=12kbrbr02

Eθ=12kθθθ02

Eϕ=n=03Ancosn1ϕ

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
ϵ (kcal/mol)
σ (Å)
rc (Å)
 
kb (kcal/(mol·Å2))
r0 (Å)
 
kθ (kcal/mol)
θ0 (deg)
 
A0 (kcal/mol)
A1 (kcal/mol)
A2 (kcal/mol)
A3 (kcal/mol)
CHx… CHy
(x = 1, 2, 3; y = 2, 3) [25]
0.1119
4.01
12
CHx-CHy
95.89
1.54
CHx-CH2-CHy
57.6
111.6
CHx-CH2-CH2-CHy
1.73
−4.493
0.776
6.99
(x, y = 1, 2, 3) [27]
(x, y = 1, 2, 3) [27]
(x, y = 1, 2, 3) [25]
CH… CH [26]
0.0789
3.85
12
 
 
 
CHx-CH-CHy
62.1
109.74
CHx-CH-CH2-CHy
0.8143
1.7926
0.3891
3.6743
(x, y = 2) [26]
                    (x, y = 2) [28]