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. 2013 Jul 29;8(7):e69790. doi: 10.1371/journal.pone.0069790

Table 2. List of proteins meeting selection criteria, with high SPAAN score, globular proteins and have no reference in literature.

RvID Protein* Size (kDa) SPAAN (Pad Value) Localization Globular Proteins CDD Domain Analysis (E Value)$
Rv1116A Conserved hypothetical protein 9.040 0.717 Extracellular Globular None
Rv1987 Possible chitinase 14.920 0.670 Extracellular Globular Carbohydrate binding domain, Cellulose binding domain (4.69e-24)
Rv1881c lppE (Lipoprotein) 14.940 0.664 Extracellular Globular Myco_19_kDa super family (6.82e-04)
Rv2599 Probable conserved membrane protein 14.950 0.752 Extracellular Globular Domain of unknown function (DUF4247) (2.07e-31)
Rv1984c cfp21 (Hydrolyzes cutin) 21.780 0.685 Extracellular Globular Cutinase (2.20e-52)
Rv0309 Conserved exported protein 22.530 0.691 Extracellular Globular L,D-transpeptidase catalytic domain, YkuD, COG3786 (1.43e-79)
Rv3576 lppH (Possible conserved lipoprotein) 25.020 0.693 Extracellular Globular PknH-like extracellular domain (3.65e-47)
Rv3822 Conserved hypothetical protein 41.410 0.739 Extracellular Globular PE-PPE domain (1.53e-68)
Rv0050 ponA (Peptidoglycan synthesis) 71.120 0.688 Extracellular Globular Penicillin binding protein transpeptidase domain (1.41e-49)
Rv0584 Possible conserved exported protein 92.950 0.744 Extracellular Globular Glycosyl hydrolase family 92 (0e+00)
Rv1037c esxI, (Putative ESAT-6 like protein) 9.830 0.737 Undecided Globular WXG100 (2.83e-08)
Rv3890c esxC, (ESAT-6 like protein) 9.920 0.800 Undecided Globular COG4842[COG4842], Uncharacterized protein conserved in bacteria (1.65e-15)
Rv3337 Conserved hypothetical protein 13.180 0.698 Undecided Globular Abhydrolase_6[pfam12697], Alpha/beta hydrolase family (5.08e-04)
Rv3067 Conserved hypothetical protein 13.930 0.768 Undecided Globular Protein of unknown function (DUF732) pfam05305 (1.27e-19)
Rv3705c Conserved protein 22.360 0.689 Undecided Globular PknH_C[pfam14032], PknH-like extracellular domain (6.95e-37)
Rv1115 Possible exported protein 24.050 0.665 Undecided Globular None
Rv3717 Conserved hypothetical protein 24.840 0.698 Undecided Globular MurNAc-LAA[cd02696], N-acetylmuramoyl-L-alanine amidase (8.86e-39)
Rv0590 mce2B, (MCE-Family protein) 29.160 0.685 Undecided Globular MCE[pfam02470], mce related protein, ABC-type transport system, (1.78e-47)
Rv3207c Conserved protein 31.030 0.797 Undecided Globular DUF3152[pfam11350], Protein of unknown function (DUF3152) (2.07e-107)
Rv0988 # Possible conserved exported protein 42.780 0.697 Undecided Globular COG5621[COG5621], Predicted secreted hydrolase (2.01e-147)

Notes:

*

Annotation according to TubercuList [42].

$

E-value from CDD search.

#

There was no evidence from the algorithms for ‘extracellular’ (claim) for Rv0988. Therefore it was declared ‘undecided’ because the TubercuList annotation reports this protein as exported protein.