Table 2. List of proteins meeting selection criteria, with high SPAAN score, globular proteins and have no reference in literature.
RvID | Protein* | Size (kDa) | SPAAN (Pad Value) | Localization | Globular Proteins | CDD Domain Analysis (E Value)$ |
Rv1116A | Conserved hypothetical protein | 9.040 | 0.717 | Extracellular | Globular | None |
Rv1987 | Possible chitinase | 14.920 | 0.670 | Extracellular | Globular | Carbohydrate binding domain, Cellulose binding domain (4.69e-24) |
Rv1881c | lppE (Lipoprotein) | 14.940 | 0.664 | Extracellular | Globular | Myco_19_kDa super family (6.82e-04) |
Rv2599 | Probable conserved membrane protein | 14.950 | 0.752 | Extracellular | Globular | Domain of unknown function (DUF4247) (2.07e-31) |
Rv1984c | cfp21 (Hydrolyzes cutin) | 21.780 | 0.685 | Extracellular | Globular | Cutinase (2.20e-52) |
Rv0309 | Conserved exported protein | 22.530 | 0.691 | Extracellular | Globular | L,D-transpeptidase catalytic domain, YkuD, COG3786 (1.43e-79) |
Rv3576 | lppH (Possible conserved lipoprotein) | 25.020 | 0.693 | Extracellular | Globular | PknH-like extracellular domain (3.65e-47) |
Rv3822 | Conserved hypothetical protein | 41.410 | 0.739 | Extracellular | Globular | PE-PPE domain (1.53e-68) |
Rv0050 | ponA (Peptidoglycan synthesis) | 71.120 | 0.688 | Extracellular | Globular | Penicillin binding protein transpeptidase domain (1.41e-49) |
Rv0584 | Possible conserved exported protein | 92.950 | 0.744 | Extracellular | Globular | Glycosyl hydrolase family 92 (0e+00) |
Rv1037c | esxI, (Putative ESAT-6 like protein) | 9.830 | 0.737 | Undecided | Globular | WXG100 (2.83e-08) |
Rv3890c | esxC, (ESAT-6 like protein) | 9.920 | 0.800 | Undecided | Globular | COG4842[COG4842], Uncharacterized protein conserved in bacteria (1.65e-15) |
Rv3337 | Conserved hypothetical protein | 13.180 | 0.698 | Undecided | Globular | Abhydrolase_6[pfam12697], Alpha/beta hydrolase family (5.08e-04) |
Rv3067 | Conserved hypothetical protein | 13.930 | 0.768 | Undecided | Globular | Protein of unknown function (DUF732) pfam05305 (1.27e-19) |
Rv3705c | Conserved protein | 22.360 | 0.689 | Undecided | Globular | PknH_C[pfam14032], PknH-like extracellular domain (6.95e-37) |
Rv1115 | Possible exported protein | 24.050 | 0.665 | Undecided | Globular | None |
Rv3717 | Conserved hypothetical protein | 24.840 | 0.698 | Undecided | Globular | MurNAc-LAA[cd02696], N-acetylmuramoyl-L-alanine amidase (8.86e-39) |
Rv0590 | mce2B, (MCE-Family protein) | 29.160 | 0.685 | Undecided | Globular | MCE[pfam02470], mce related protein, ABC-type transport system, (1.78e-47) |
Rv3207c | Conserved protein | 31.030 | 0.797 | Undecided | Globular | DUF3152[pfam11350], Protein of unknown function (DUF3152) (2.07e-107) |
Rv0988 # | Possible conserved exported protein | 42.780 | 0.697 | Undecided | Globular | COG5621[COG5621], Predicted secreted hydrolase (2.01e-147) |
Notes:
Annotation according to TubercuList [42].
E-value from CDD search.
There was no evidence from the algorithms for ‘extracellular’ (claim) for Rv0988. Therefore it was declared ‘undecided’ because the TubercuList annotation reports this protein as exported protein.