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. 2013 Jul 30;4:286. doi: 10.3389/fpls.2013.00286

Table 2.

The Zrt and Irt -like protein (ZIP) family genes and bZIP genes identified in the P. vulgaris genome.

Sequence ID Gene Chrom Pos ition Homology to A. thaliana Homology to M. truncatula
Phvulv091010812m PvZIP1 Chr01 3,442,406 ATZIP4_Zinc transporter 4 3E-63 ZIP-like zinc transporter -Medtr1g016120.1 4E-145
Phvulv091015745m PvZIP2 Chr01 49,770,995 ATZIP4_Zinc transporter 4 0 Zinc transporter 5 -Medtr3g082050.1 4E-21
Phvulv091015614m PvZIP3 Chr01 49,839,431 ZIP3_Zinc transporter 3 4E-37 Zinc transporter 5 -Medtr3g082050.4 2E-22
Phvulv091019402m PvZIP4 Chr02 33,735,220 IAR1_ZIP metal ion transporter 9.5E-42 Zinc transporter 5
Phvulv091012034m PvZIP5 Chr05 5,645,010 ZIP1_Zinc transporter 1 3E-156 Zinc transporter - Medtr3g082050.3 2E-109
Phvulv091029608m PvZIP6 Chr05 37,426,497 ZIP2_ZRT/IRT-like protein 2 2.1E-46 Iron regulated transporter -Medtr2g097580.1 5E-99
Phvulv091029689m PvZIP7 Chr05 37,431,839 ZIP2_ZRT/IRT-like protein 2 2E-43 Iron regulated transporter -Medtr2g097580.1 2E-161
Phvulv091029664m PvZIP8 Chr05 37,715,863 ZTP29_ZIP metal ion transporter 6.5E-23 Zinc transporter 5 -Medtr4g065640.1 2E-130
Phvulv091026664m PvZIP9 Chr06 200,959 ZIP5_Zinc transporter 5 1E-132 Zinc transporter -Medtr3g082050.1 1E-150
Phvulv091009317m PvZIP10 Chr06 1,033,953 ZIP5_Zinc transporter 5 4E-130 Zinc transporter -Medtr3g082050.1 4E-44
Phvulv091009315m PvZIP11 Chr06 1,040,964 ZIP5_Zinc transporter 5 1E-129 Zinc transporter zupT -Medtr3g082050.1 7E-147
Phvulv091018095m PvZIP12 Chr06 17,174,396 ZIP11_Zinc transporter 11 5.7E-52 Zinc transporter 5 -Medtr2g097580.1 3E-113
Phvulv091002113m PvZIP13 Chr06 18,954,219 ATZIP6_ZIP metal ion transporter 1.5E-56 Zinc transporter 5 -Medtr5g071990.1 7E-141
Phvulv091007436m PvZIP14 Chr08 7,634,926 ZIP metal ion transporter family 1.2E-14 Zinc transporter 5 -Medtr7g074060.1 0
Phvulv091022274m PvZIP15 Chr08 57,181,509 ATZIP6_ZIP metal ion transporter 2E-158 Zinc transporter -Medtr5g071990.1 2E-139
Phvulv091004709m PvZIP16 Chr08 59,351,699 ZIP1_Zinc transporter 1 3.2E-33 Zinc transporter 6-Medtr3g082050.3 7E-91
Phvulv091010505m PvZIP17 Chr10 9,817,594 ZIP metal ion transporter family 0 ZIP transporter -Medtr7g074060.1 0
Phvulv091003125m PvZIP18 Chr11 5,071,268 ZTP29_ZIP metal ion transporter 1.3E-20 Zinc transporter 6, -Medtr4g065640.1 3E-124
Phvulv091030363m PvZIP19 Chr02 19,642,824 ZIP10_Zinc transporter 10 1E-102 Zinc transporter 3E-174
Phvulv091011372m PvIRT1 Chr03 49,001,506 IRT1_Iron-regulated transporter 1 4E-126 Zinc transporter 3E-169
Phvulv091011626m PvIRT2 Chr03 49,013,793 IRT1_Iron-regulated transporter 1 5E-112 Zinc/iron permease-Medtr8g105030.1 6E-129
Phvulv091000876m PvIRT3 Chr09 12,670,278 ATIRT3_Iron regulated transporter 3 2.2E-68 ZIP transporter - Medtr3g 104400.1 2E-131
Phvulv091000875m PvIRT4 Chr09 12,670,315 ATIRT3_Iron regulated transporter 3 9.5E-42 Zinc transporter 4—Medtr4g083570.1 3E-174
Phvulv091018638m bZIP1 Chr05 3,213,447 bZIP23—transcription factor family 7E-49 Basic leucine zipper—Medtr4g073100.1
Phvulv091015330m bZIP2 Chr11 3,134,797 bZIP19—transcription factor family 1E-109 Basic leucine zipper—Medtr4g073100.1 5E-57
Phvulv091015414m bZIP3 Chr11 3,709,270 bZIP44 | basic leucine-zipper 44 2E-52 bZIP transcription factor—Medtr4g070860.1 4E-71

Chromosome and position in base pairs indicate the location of each gene. Their respective homologs in A. thaliana and M. truncatula are shown. The program tBlastn was used to compare the A. thaliana ZIP genes against the bean genome. Homology was based on E–10