. Author manuscript; available in PMC: 2013 Jul 30.

Published in final edited form as: Anal Bioanal Chem. 2010 Jun 27;398(1):391–404. doi: 10.1007/s00216-010-3929-8

Table 2.

Summary indicating the number of confident proteins identified having<1% FDR, and further, those proteins having≥4 SpC

Sample	Protein IDs <1% FDR	Total spectral counts (SpC)	Protein IDs ≥4 SpC	# SpC of proteins ≥4 SpC
Tma80	396	6827	287	6636
Tma75	429	7146	301	6903
Co75_Tma	67	212	14	127
Csac75	267	3085	160	2866
Co75_Csac	218	2681	124	2499

Total number of SpC was calculated as the sum of individual SpC from each protein group. The co-culture sample was divided into two protein groups corresponding to T. maritima (Co75_Tma) or C. saccharolyticus (Co75_Csac) proteins identified in the co-culture