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. 2013 Jul 23;1:e113. doi: 10.7717/peerj.113

Table 1. Number of raw sequencing reads, sequencing reads corrected, nucleotides (nt) corrected, and approximate runtime for each of the datasets.

Note that neither AllPaths nor Sga provides information regarding the number of reads affected by the correction process.

Simulated dataset Total reads Num reads corr Num nt corr Runtime
Raw reads 30M PE n/a n/a n/a
AllPathsLG Corr. 30M PE ? 139,592,317 ∼8 h
Sga Corr. 30M PE ? 19,826,919 ∼38 min
Reptile Corr. 30M PE 2,047,088 7,782,594 ∼3 h
Seecer Corr. 30M PE 8,782,350 14,033,709 ∼5 h