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. Author manuscript; available in PMC: 2013 Jul 31.
Published in final edited form as: Infect Genet Evol. 2010 Dec 13;11(2):391–398. doi: 10.1016/j.meegid.2010.11.010

Table 2.

pvcsp Repeat motifs and post-repeat region nucleotide and amino acid sequences.

PvCSP variant Motifs Post-repeat region
VK210a
  Nucleotideb GGH GAY AGW GCA SMT GGA CAR CCA GCW
  Amino acid G D R A D/A/PG Q P A
Terminal repeat GGA GAT AGA GCA GCT GGA CAG CCA GCA GGA AAT GGT GCA GGT GGA CAG GCA GCA
VK247c G D R A A G Q P A G N G A G G Q A A
Nucleotideb GCA AAT GGD GCH GRY RAT CAA CCA GGA
  Amino acid A N G A G/D D/N Q P G
Terminal repeat GCA AAT GGG GCA GGT AAT CAA CCM GGA GCA AAT GGA GCA GGT GGA CAG GCA GCA
A N G A G N Q P G A N G A G G Q A A
a

Sequence data analyzed from GenBank accession nos. AY443700, AY443726, AY632243, AY632256, AY632288, AY632319, and M11926.

b

ln the nucleotide sequence H=A/C/T; Y=T/C, W=A/T; S=G/C; M=A/C; R=G/A; D=G/A/T.

c

Sequence data analyzed from GenBank accession nos. AY632245, AY632318, AY632299, AY632316, and M28745.