Table 3. Identification, at a genus level, of selected bands from DGGE gels used to analyze the PCR and RT-PCR products obtained from the amplification of the olive and brine samples.
Untreated table olive fermentation | NaOH treated table olive fermentation | ||||||||
DNA | |||||||||
Closest described relative | Identity % | Phylum | Class | Order | Family | Olive | Brine | Olive | Brine |
Marinilactibacillus | 99–100 | Firmicutes | Bacilli | Lactobacillales | Carnobacteriaceae | * | * | ||
Halomonas | 98–100 | Proteobacteria | Gamma | Oceanospirillales | Halomonadaceae | * | * | ||
Salinicola | 99–100 | Proteobacteria | Gamma | Oceanospirillales | Halomonadaceae | * | |||
Lactobacillus | 99–100 | Firmicutes | Bacilli | Lactobacillales | Lactobacillaceae | * | * | ||
Acinetobacter | 99–100 | Proteobacteria | Gamma | Pseudomonadales | Moraxellaceae | * | |||
Enterobacter | 99–100 | Proteobacteria | Gamma | Enterobacteriales | Enterobacteriaceae | * | * | ||
Citrobacter | 99–100 | Proteobacteria | Gamma | Enterobacteriales | Enterobacteriaceae | * |
The presence in the specified sample is indicated by an asterisk.