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. 2013 Jul 31;8(7):e69074. doi: 10.1371/journal.pone.0069074

Table 4. Number of sequences analyzed, observed diversity and estimated sample coverage for 16S rRNA amplicons from olives fermentations.

Reads Observed OTUs Shannon Chao1 ESC (%)
Not treated olives fermentation
Olive surfaces
Day of fermentation Target
3 RNA 1697 116 4.68 128.5 98.53
3 DNA 4258 74 2.43 78.33 99.67
8 RNA 5957 70 2.09 80.91 99.73
8 DNA 5199 78 2.92 101.1 99.58
90 RNA 1831 49 2.7 73 99.13
90 DNA 6325 73 2.79 88.55 99.70
Brines
Day of fermentation Target
8 RNA 1894 39 2.09 54.6 98.81
8 DNA 3980 56 2.47 77.38 99.52
90 RNA 2894 68 3.03 83 99.27
90 DNA 3763 77 3.02 89.05 99.39
NaOH treated olives fermentation
Olive surfaces
Day of fermentation Target
3 RNA 1131 40 2.22 57.14 98.59
3 DNA 3306 81 2.6 110.08 99.15
8 RNA 2813 51 2 82.63 99.18
8 DNA 3171 53 2.06 70 99.43
90 RNA 2945 91 3.07 128.71 98.88
90 DNA 1465 80 3.59 107.19 97.95
Brines
Day of fermentation Target
8 RNA 7834 127 3.38 156.75 99.55
8 DNA 2772 101 3.56 125 98.81
90 RNA 5851 82 2.75 111.25 99.54
90 DNA 6428 112 3.27 137.83 99.52