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. 2013 Jul 31;8(7):e68271. doi: 10.1371/journal.pone.0068271

Figure 4. Design of structure-based pharmacophore models.

Figure 4

The metal ions and key residues of the representative Shh structure of (a) the Shh-PL2 (slashdot green) and (b) the Shh-robotnikinin (gold). The zinc and calcium ions are marked by blue-gray and green spheres, and the key residues are represented by stick model. Chemical features are color coded as follows: HBA, green; HBD, magenta; HYP, cyan. Selected chemical features based on the representative Shh structure generated from (c) the Shh-PL2 and (d) Shh-robotnikinin. Completed pharmacophore models of (e) the Shh-PL2 and (f) Shh-robotnikinin.