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. 2013 Aug 1;9(8):e1003649. doi: 10.1371/journal.pgen.1003649

Table 1. Study Information.

Study label TLA Tissue N N genes PMID Accession Platform Genotype
CAP_LCL CPL LCLs 480 18718 20339536 GSE36868 GPL6883-5509 ILMN 310K & ILMN QUAD
Stranger_LCL STL LCLs 210 15752 17289997 GSE6536 GPL2507 NA
Harvard_cerebellum HCE cerebellum 540 18263 NA syn4505 GPL4372 GPL14932
Harvard_prefrontal_cortex HPC prefrontal cortex 678 18257 NA syn4505 GPL4372 GPL14932
Harvard_visual_cortex HVC visual cortex 463 18263 NA syn4505 GPL4372 GPL14932
GenCord_fibroblast GCF blood fibroblasts 83 16691 19644074 GSE17080 GPL6884 GPL6982
GenCord_LCL GCL LCLs 85 16691 19644074 GSE17080 GPL6884 GPL6982
GenCord_tcell GCT blood t cells 85 16691 19644074 GSE17080 GPL6884 GPL6982
UChicago_liver CLI liver 206 16236 21637794 GSE26106 GPL4133 GPL8887
Merck_liver MLI liver 266 18234 18462017 GSE9588 GPL4372 GPL3720&GPL3718&GPL6987
Myers_brain MBR brain 193 11707 17982457 GSE8919 GPL2700 GPL3720&GPL3718

Accession numbers are from the GEO database when prefixed with GSE and from the Synapse database when prefixed with syn. Study label is the name used to refer to the study throughout the paper. TLA is the three letter acronym used to reference the study in figures. CAP stands for the Cholesterol and Pharmacogenetics Trial [55], [74].