Table 3. Overview of the interaction datasets and the analysis: interaction datasets.
Dataset | Reference | URL | No. ORFs covered | No. of interactions |
---|---|---|---|---|
MIPS complex catalogs | (22) | http://mips.gsf.de/proj/yeast/CYGD/db/index.html | 871 | 8250 |
BIND | (23) | http://www.bind.ca/ | 3789 | 5965 |
DIP | (24) | http://dip.doe-mbi.ucla.edu/dip/Main.cgi | 4716 | 15113 |
Yeast two-hybrid | (18) | http://genome.c.kanazawa-u.ac.jp/Y2H/ | 3278 | 4393 |
Yeast two-hybrid | (21) | http://www.nature.com/cgi-taf/DynaPage.taf?file=/nature/journal/v403/n6770/full/403623a0_fs.html | 1044 | 981 |
In vivo pull-down | (20) | http://yeast.cellzome.com/ | 1361 | 31304 |
In vivo pull-down | (19) | http://www.mdsp.com/yeast/ | 1578 | 25333 |