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. 2013 Aug 5;8(8):e71231. doi: 10.1371/journal.pone.0071231

Table 1. Characteristics of SNPs studied and study population prevalences.

dbSNP ID Physical position (bp) Alleles, functional effect Minor allele frequency 95% CI Hardy-Weinberg (p value)
rs12068753 159692537 T/A, 5′ UTR A = 5.8% 4.1–7.6 0.251
rs1341665 159691559 G/A, 5′ UTR A = 44.9% 41.0–48.7 0.443
rs12084589 159688441 C/A, 5′ UTR A = 5.7% 4.0–7.4 0.263
rs3093059 159685136 T/C, 5′ UTR C = 5.8% 4.1–7.6 0.251
rs2794521 159685096 T/C, 5′ UTR C = 21.7% 18.5–24.9 0.101
rs3091244 159684665 C/T, 5′ UTR T = 30.2% 26.7–33.6 0.698
rs1800947 159683438 C/G, coding, synon G = 4.0% 2.5–5.5 0.517
rs3093068 159681364 C/G, 3′ UTR G = 5.9% 4.1–7.8 0.252
rs3093070 159680817 A/C, 3′ UTR C = 0.8% 0.1–1.5 0.885
rs876538 159675717 C/T, 3′ UTR T = 18.4% 15.8–20.9 0.206
Boston and Philadelphia replication cohort
dbSNP ID alleles,functional effect Minor allele frequency 95% CI Hardy-Weinberg (p value)
rs 12068753 proxy for rs3093068 159692537 T/A, 5′ UTR A = 7% 5.2–8.8 1.00
rs876538 159675717 C/T, 3′ UTR T = 21% 18.2–23.8 0.14
rs1205 159682233 C/T, 3′ UTR T = 35% 31.7–38.3 0.36