Reconstruction of the Sso7d gene |
Sso-W1
|
5′-GTATGGCGTGTGGGCAAGATGAT-3′
|
Sso-W2
|
5′-GAAAAGGACGCGCCGAAGGAGCTG-3′
|
Sso-C1
|
5′-CACACGCCATACTTTCTTGATCTTGGAGATGTCTACCTCTTTTTCTTCGCCTTTGTACTTGAACTTTACGGTTGC-3′
|
Sso-C2
|
5′-GCGCGTCCTTTTCGCTTACCGCACCGCGGCCGGTCTTGCCACCGCCCTCGTCGTAGGTGAAGGAGATCATCTTGCC-3′
|
Sso-C3
|
5′-GATTAATCCAGTGCCTTGGGACTAGTGCCACCGCCGCCCTTTTTCTGCTTCTCCAGCATCTGCAGCAGCTCCTTCG-3′
|
Sso-R1
|
5′-ACGAATTCGAGCGCAACCGTAAAGTTCAAG-3′
|
Sso-Xba
|
5′-GCGCTCTAGATTAATCTTTTTCTGCTTCTCCAGCAT-3′
|
Primers used for activity and processivity assays |
–47M13L
|
5′-CGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCC-3′
|
–40M13LFF
|
5′-FAM-GTTTTCCCAGTCACGACGTTGTAAAACGACGGCC-3′
|
Primers used for extension efficiency assay |
L30350F
|
5′-CCTGCTCTGCCGCTTCACGC-3′
|
L71-0.5R (0.5 kb)
|
5′-TCCGGATAAAAACGTCGATGACATTTGC-3′
|
L71-1R (1 kb)
|
5′-GATGACGCATCCTCACGATAATATCCGG-3′
|
L72-2R (2 kb)
|
5′-CCATGATTCAGTGTGCCCGTCTGG-3′
|
L72-5R (5 kb)
|
5′-CGAACGTCGCGCAGAGAAACAGG-3′
|
L72-8R (8 kb)
|
5′-GCCTCGTTGCGTTTGTTTGCACG-3′
|
L71-10R (10 kb)
|
5′-GCACAGAAGCTATTATGCGTCCCCAGG-3′
|
L71-12R (12 kb)
|
5′-TCTTCCTCGTGCATCGAGCTATTCGG-3′
|
L71-15R (15 kb)
|
5′-CTTGTTCCTTTGCCGCGAGAATGG-3′
|
Primers used for salt dependence PCR assay |
L30350F
|
5′-CCTGCTCTGCCGCTTCACGC-3′
|
L31240R |
5′-GCACAGCGGCTGGCTGAGGA-3′ |