Table 2. Data collection and refinement statistics.
sporoAMA1c apo | sporoAMA1c-sporoRON2-D3 | |
Data collection | ||
Spacegroup | P21 | C2221 |
a, b, c (Å) | 179.19, 155.52, 180.59 | 49.37, 124.18, 171.91 |
α, β, γ (deg.) | 90, 92.31, 90 | 90, 90, 90 |
Wavelength (Å) | 0.9795 | 0.9795 |
Resolution range (Å) | 79.30–2.35 (2.48–2.35) | 85.96–3.10 (3.27–3.10) |
Measured reflections | 1391080 | 39279 |
Unique reflections | 391285 | 9716 |
Redundancy | 3.6 (2.4) | 4.0 (3.7) |
Completeness (%) | 95.4 (75.8) | 97.8 (95.8) |
I/σ(I) | 10.0 (2.1) | 8.2 (3.5) |
Rmerge a | 0.081 (0.341) | 0.114 (0.311) |
Refinement Statistics | ||
Resolution (Å) | 78.04–2.35 (2.41–2.35) | 85.96–3.10 (3.18–3.10) |
Rwork b | 0.209 (0.331) | 0.205 (0.311) |
Rfree c | 0.244 (0.353) | 0.263 (0.378) |
No. of atoms | ||
Protein (A/B/C/D/ | 2927/2899/2899/2897 | 2745/229 |
E/F/G/H/ | 2927/2889/2927/2913/ | |
I/J/K/L) | 2865/2891/2921/2921 | |
Solvent | 1695 | 7 |
Glycerol | 108 | N/A |
B-values (Å2) | ||
Protein (A/B/C/D/E/ | 37.5/35.7/36.3/35.6/36.0/ | 49.5/58.6 |
F/G/H/I/J/ | 38.2/38.2/38.7/46.1/48.3/ | |
K/L) | 49.9/50.0 | |
Solvent | 43.7 | 31.7 |
Glycerol | 43.6 | N/A |
r.m.s. deviation from ideality | ||
Bond lengths (Å) | 0.013 | 0.011 |
Bond angles (deg.) | 1.31 | 1.22 |
Ramachandran statistics (%) | ||
Most favoured | 96.1 | 95.9 |
Allowed | 3.9 | 4.1 |
Disallowed | 0.0 | 0.0 |
Values in parentheses are for the highest resolution shell.
Rmerge = ∑hkl ∑i |Ihkl,i - [Ihkl]|/∑hkl ∑i Ihkl,i, where [Ihkl] is the is the average of symmetry related observations of a unique reflection.
Rwork = ∑|Fobs-Fcalc|/∑Fobs, where Fobs and Fcalc are the observed and the calculated structure factors, respectively.
Rfree is R using 5% (apo) or 10% (complex) of reflections randomly chosen and omitted from refinement.