Table 4. The variables used in MEME to detect motifs.

Variables	Command	Value
Sequence use DNA alphabet	-DNA	–
Distribution of motifs	-mod	oops
Maximum number of motifs to find	-nmotifs	25
Stop if motif E-value greater than <evt>	-evt	1e+100
Minimum motif width	-minw	20
Maximum motif width	-maxw	20
Stop if motif IC lower than	-minic	0.0
Maximum number of sites for each motif	-maxsites	10
Weight on expected number of sites	-wnsites	0.8