Table 2. List of 57 genes in the 338kb genomic region on scB (sites 1689672−2027728) that shows a perfect match to sex.
| Gene | Description | Start | End |
|---|---|---|---|
| 04131a | Cytochrome b561 (probable) | 1695908 | 1696955 |
| 04132a | Cytochrome b561 (probable) | 1697882 | 1698854 |
| 04133a | Protein pelota (probable) | 1699354 | 1700487 |
| 04134a | Protein VERNALIZATION INSENSITIVE 3 (probable) | 1701336 | 1704731 |
| 04135 | Zinc finger protein 4 (probable) | 1708545 | 1709366 |
| 04136a | Signal transduction histidine-protein kinase barA (probable) | 1719309 | 1725022 |
| 04137a | Conserved oligomeric Golgi complex subunit 8 (COG complex subunit 8) (probable) | 1725631 | 1727100 |
| 04138 | F-box/kelch-repeat protein At3g06240 (probable) | 1730662 | 1732093 |
| 04139a | Probable receptor protein kinase TMK1, Precursor (putative) | 1737410 | 1740919 |
| 04140a | Probable receptor protein kinase TMK1, Precursor (putative) | 1741738 | 1745245 |
| 04141a | U-box domain-containing protein 21 (probable) | 1749596 | 1750933 |
| 04142 | Zonadhesin, Precursor (probable) | 1759358 | 1759831 |
| 04143a | THO complex subunit 2 (Tho2) (probable) | 1762188 | 1774622 |
| 04144 | Putative FBD-associated F-box protein At5g56690 (probable) | 1776627 | 1778060 |
| 04145a | Probable clathrin assembly protein At4g32285 | 1779727 | 1781103 |
| 04146b | Putative receptor protein kinase ZmPK1, Precursor (probable) | 1782940 | 1788099 |
| 04147 | Dihydroorotase (DHOase) (probable) | 1788929 | 1790128 |
| 04148a | Transmembrane anterior posterior transformation protein 1 homolog (probable) | 1791303 | 1802303 |
| 04149 | Cyclin-SDS (probable) | 1803461 | 1810613 |
| 04150a | Probable leucine-rich repeat receptor-like protein kinase At1g35710, Precursor | 1810803 | 1820658 |
| 04151a | PPPDE peptidase domain-containing protein 2 (probable) | 1823385 | 1824658 |
| 04152a | Uncharacterized protein At4g28440 (similar to) | 1831297 | 1832134 |
| 04153b | Putative F-box/LRR-repeat protein At5g41840 (probable) | 1832760 | 1834112 |
| 04154 | Glycine/sarcosine/betaine reductase complex component C subunit alpha (Protein PC alpha) (probable) | 1834998 | 1836143 |
| 04155a | Ubiquitin carboxyl-terminal hydrolase isozyme L5 (UCH-L5) (probable) | 1837700 | 1843573 |
| 04156 | Protein CCC1 (probable) | 1846416 | 1847932 |
| 04157 | Protein CCC1 (probable) | 1849284 | 1850869 |
| 04158 | Heat stress transcription factor A-8 (AtHsfA8) (similar to) | 1859247 | 1862358 |
| 04159 | Homeobox protein rough sheath 1 (probable) | 1863517 | 1864254 |
| 04160 | Serine/arginine repetitive matrix protein 1 (probable) | 1866464 | 1866799 |
| 04161a | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 (AtTPS6) (putative) | 1870217 | 1873846 |
| 06233 | Ribonuclease R (RNase R) (probable) | 1886708 | 1890718 |
| 06234 | Probable S-adenosylmethionine-dependent methyltransferase At5g38100 | 1892129 | 1895522 |
| 06235a | Probable RNA-dependent RNA polymerase 1 (OsRDR1) (similar to) | 1895829 | 1900439 |
| 06236a | tRNA nucleotidyltransferase, mitochondrial, Precursor (probable) | 1903160 | 1908555 |
| 06237a | Probable RNA-dependent RNA polymerase 1 (OsRDR1) (similar to) | 1909159 | 1913119 |
| 06238a | Probable RNA-dependent RNA polymerase 1 (OsRDR1) (similar to) | 1913797 | 1917596 |
| 06239 | Probable RNA-dependent RNA polymerase 2 (OsRDR2) | 1923582 | 1924947 |
| 06240 | Nucleoside diphosphate-linked moiety X motif 17 (Nudix motif 17) (probable) | 1925581 | 1926702 |
| 06241a | Pre-mRNA-splicing factor cwc22 (probable) | 1934341 | 1935780 |
| 06242 | Shikimate kinase (SK) (probable) | 1936002 | 1936594 |
| 06243a | Probable RNA-dependent RNA polymerase 1 (OsRDR1) (similar to) | 1938940 | 1942992 |
| 06244a | Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (probable) | 1944681 | 1950781 |
| 06245 | Two-component response regulator ARR14 (similar to) | 1952583 | 1955894 |
| 06246 | tRNA modification GTPase mnmE (probable) | 1957499 | 1958195 |
| 06247a | Adagio protein 3 (FBX2a) (putative) | 1959870 | 1962462 |
| 06248a,b | Dynamin-related protein 1C (putative) | 1963652 | 1968778 |
| 06249 | F-box protein At3g59000 (probable) | 1979978 | 1981804 |
| 06250 | hypothetical protein | 1982266 | 1985447 |
| 06251 | Myosin-7 (MyHC-beta) (probable) | 1994893 | 1999664 |
| 06252 | Integrator complex subunit 11 (Int11) (probable) | 2001649 | 2006256 |
| 06253a | E3 ubiquitin-protein ligase At4g11680 (probable) | 2008307 | 2010848 |
| 06254 | cGMP-gated cation channel alpha-1 (CNG-1) (probable) | 2012734 | 2013688 |
| 06255 | Farnesyltranstransferase, Precursor (similar to) | 2014248 | 2014574 |
| 06256a | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, Precursor (putative) | 2014656 | 2017275 |
| 06257a | Nuclear pore complex protein Nup155 (probable) | 2018622 | 2026133 |
| 06258 | Protein VAC14 homolog (probable) | 2027060 | 2033300 |
a
Genes with Plant Ontology categorization under “pollen” based on expression data in Arabidopsis (Schmid et al. 2005).
b
Genes with putative functional roles in pollen development or recognition, highlighted in the Discussion section.