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. 2013 May 21;41(14):6828–6838. doi: 10.1093/nar/gkt374

Table 2.

CME that preferentially interact with significantly co-occurring motifs (Table 1)

CME P-value Interaction frequency Description
ENSP00000336750 5.50E-04 5.50% Suppressor of Ty 7 (Saccharomyces cerevisiae)-like
ENSP00000308227 5.90E-04 9.60% High mobility group AT-hook
ENSP00000264709 9.60E-04 8.20% DNA (cytosine-5-)-methyltransferase 3 alpha
ENSP00000362649 1.20E-03 16.00% Histone deacetylase 1
ENSP00000231509 1.60E-03 12.00% Nuclear receptor subfamily ‘3’, group ‘C’, member 1
ENSP00000349508 2.30E-03 6.80% Chromodomain helicase DNA-binding protein 4
ENSP00000278823 2.40E-03 6.20% Metastasis associated 1 ‘family’, member 2
ENSP00000367207 2.90E-03 15.00% v-myc myelocytomatosis viral oncogene homolog (avian)
ENSP00000343325 2.90E-03 5.50% Protein kinase N1
ENSP00000263119 4.20E-03 6.20% Calcineurin-binding protein 1
ENSP00000362674 5.30E-03 5.50% Histone deacetylase 8
ENSP00000334061 5.40E-03 6.20% Histone deacetylase 6
ENSP00000386759 7.30E-03 6.80% SET domain containing 2
ENSP00000302967 9.20E-03 10.00% Histone deacetylase 3
ENSP00000352516 9.50E-03 8.20% DNA (cytosine-5-)-methyltransferase 1
ENSP00000284384 1.20E-02 6.80% Protein kinase ‘C’, alpha
ENSP00000349049 1.30E-02 5.50% Lysine (K)-specific demethylase 1A
ENSP00000225983 1.40E-02 8.20% Histone deacetylase 5
ENSP00000381331 1.50E-02 9.60% Histone deacetylase 2
ENSP00000371067 2.30E-02 8.20% Janus kinase 2
ENSP00000264606 2.40E-02 7.50% Histone deacetylase 4
ENSP00000264010 2.50E-02 6.20% CCCTC-binding factor (zinc finger protein)
ENSP00000268712 2.50E-02 9.60% Nuclear receptor corepressor 1
ENSP00000337088 2.70E-02 6.20% Multiple endocrine neoplasia I
ENSP00000356480 2.80E-02 5.50% Ring finger protein 2
ENSP00000231487 2.90E-02 6.20% S-phase kinase-associated protein 1
ENSP00000263253 3.00E-02 15.00% E1A-binding protein p300
ENSP00000267163 3.10E-02 9.60% Retinoblastoma 1

Column 3 denotes the percentage of significant motifs interacting with the CME.