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. 2013 May 5;20(4):403–423. doi: 10.1093/dnares/dst019

Table 1.

List of NAC transcription factor genes in potato (Solanum tuberosum L.) along with their corresponding proteins, CDS and protein length, duplications and Arabidopsis thaliana orthologs

Gene Protein Protein identifier Chromosome no. CDS length (bp) Protein length (aa) Duplications At ortholog locus At locus description Score (bits) e-value
StNAC001 StNAC001 PGSC0003DMP400000341 chr01 741 246 Dispersed AT5G62380.1 ANAC101, VND6 47 1.00e−05
StNAC002 StNAC002 PGSC0003DMP400058270 chr01 423 140 Dispersed AT4G01520.1 ANAC067 36 0.007
StNAC003 StNAC003 PGSC0003DMP400069271 chr01 825 274 Dispersed AT3G10480.1 ANAC050 71 6.00e−13
StNAC004 StNAC004 PGSC0003DMP400031815 chr01 1212 403 Dispersed AT2G02450.1, AT2G02450.2 ANAC034, ANAC035 312 2.00e−85
StNAC005 StNAC005 PGSC0003DMP400051813 chr01 588 195 Dispersed AT5G64530.1 ANAC104, XND1 221 4.00e−58
StNAC006 StNAC006 PGSC0003DMP400037231 chr02 1689 562 Dispersed AT1G65910.1 ANAC028 427 e−119
StNAC007 StNAC007.1 PGSC0003DMP400015241 chr02 738 245 Dispersed AT2G17040.1 ANAC036 231 5.00e−61
StNAC007.2 PGSC0003DMP400015242 504 167 AT2G17040.1 ANAC036 202 7.00e−53
StNAC008 StNAC008 PGSC0003DMP400067304 chr02 813 270 Proximal AT5G46590.1 ANAC096 41 0.001
StNAC009 StNAC009 PGSC0003DMP400041300 chr02 1029 342 Tandem AT4G27410.2 ANAC072, RD26 39 0.006
StNAC010 StNAC010 PGSC0003DMP400057983 chr02 1086 361 Tandem AT5G46590.1 ANAC096 42 5.00e−04
StNAC011 StNAC011 PGSC0003DMP400041296 chr02 981 326 Tandem AT5G46590.1 ANAC096 39 0.004
StNAC012 StNAC012 PGSC0003DMP400041297 chr02 978 325 Tandem AT2G46770.1 ANAC043, NST1 45 6.00e−05
StNAC013 StNAC013 PGSC0003DMP400058560 chr02 558 185 Tandem AT3G10500.1 ANAC055, ATNAC3 48 4.00e−06
StNAC014 StNAC014 PGSC0003DMP400060071 chr02 804 267 Tandem AT3G10500.1 ANAC055, ATNAC3 37 0.02
StNAC015 StNAC015 PGSC0003DMP400036603 chr02 945 314 Dispersed AT2G43000.1 ANAC042 235 4.00e−62
StNAC016 StNAC016.1 PGSC0003DMP400054964 chr02 882 293 Segmental AT4G28500.1 ANAC073 332 2.00e−91
StNAC016.2 PGSC0003DMP400054965 561 186 AT4G28500.1 ANAC073 205 2.00e−53
StNAC017 StNAC017.1 PGSC0003DMP400002396 chr02 972 323 Segmental AT5G61430.1 ANAC100, ATNAC5 365 e−101
StNAC017.2 PGSC0003DMP400002397 774 257 AT5G61430.1 ANAC100, ATNAC5 245 2.00e−65
StNAC018 StNAC018.1 PGSC0003DMP400002374 chr02 1191 396 Dispersed AT5G39820.1 ANAC094 285 3.00e−77
StNAC018.2 PGSC0003DMP400002375 1056 351 AT1G26870.1 ANAC009 213 2.00e−55
StNAC019 StNAC019.1 PGSC0003DMP400022332 chr02 843 280 Dispersed AT3G01600.1 ANAC044 277 6.00e−75
StNAC019.2 PGSC0003DMP400022333 1182 393 AT3G01600.1 ANAC044 287 8.00e−78
StNAC020 StNAC020 PGSC0003DMP400023688 chr03 576 191 Singleton AT2G24430.2 ANAC039 38 0.004
StNAC021 StNAC021 PGSC0003DMP400060025 chr03 699 232 Tandem AT2G02450.1, AT2G02450.2 ANAC034, ANAC035 55 3.00e−08
StNAC022 StNAC022 PGSC0003DMP400061582 chr03 786 261 Tandem AT3G10490.1/AT3G10490.2 ANAC051/ANAC052 74 7.00e−14
StNAC023 StNAC023.1 PGSC0003DMP400001112 chr03 1203 400 Segmental AT5G24590.2 ANAC091, TIP 270 1.00e−72
StNAC023.2 PGSC0003DMP400001113 813 270 AT5G24590.2 ANAC091, TIP 240 9.00e−64
StNAC023.3 PGSC0003DMP400001114 1917 638 AT5G24590.2 ANAC091, TIP 270 2.00e−72
StNAC024 StNAC024 PGSC0003DMP400032120 chr03 849 282 AT1G69490.1 ANAC029, ATNAP 312 1.00e−85
StNAC025 StNAC025 PGSC0003DMP400054092 chr03 753 250 Dispersed AT3G17730.1 ANAC057 367 e−102
StNAC026 StNAC026 PGSC0003DMP400069047 chr03 828 275 Tandem AT2G02450.1 ANAC034, ANAC035 71 8.00e−13
StNAC027 StNAC027 PGSC0003DMP400067675 chr03 699 232 Tandem AT5G46590.1 ANAC096 62 3.00e−10
StNAC028 StNAC028 PGSC0003DMP400062654 chr03 819 272 Proximal AT2G02450.1, AT2G02450.2 ANAC034, ANAC035 68 6.00e−12
StNAC029 StNAC029 PGSC0003DMP400067767 chr03 792 263 Proximal AT2G02450.1, AT2G02450.2 ANAC034, ANAC035 69 4.00e−12
StNAC030 StNAC030.1 PGSC0003DMP400033928 chr03 540 179 Segmental AT5G07680.1 ANAC079, ANAC080,ATNAC4 270 3.00e−73
StNAC030.2 PGSC0003DMP400033929 999 332 Segmental AT5G61430.1 ANAC100, ATNAC5 352 2.00e−97
StNAC031 StNAC031 PGSC0003DMP400062169 chr04 627 208 Dispersed AT5G46590.1 ANAC096 50 1.00e−06
StNAC032 StNAC032 PGSC0003DMP400005111 chr04 852 283 Dispersed AT1G69490.1 ANAC029, ATNAP 316 1.00e−86
StNAC033 StNAC033 PGSC0003DMP400055618 chr04 912 303 Tandem AT1G01720.1 ANAC002, ATAF1 324 4.00e−89
StNAC034 StNAC034 PGSC0003DMP400009745 chr04 945 314 Dispersed AT3G47570.1/AT5G53950.1 LRR Protein Kinase/ANAC098, CUC2 92/43 3e−19/3e−04
StNAC35 StNAC35 PGSC0003DMP400058145 chr04 531 176 Dispersed AT5G17260.1 ANAC086 43 1.00e−04
StNAC036 StNAC036.1 PGSC0003DMP400054265 chr04 2706 901 Segmental AT1G34190.1 ANAC017 305 1.00e−82
StNAC036.2 PGSC0003DMP400054267 1797 598 AT1G34190.1 ANAC017 347 1.00e−95
StNAC036.3 PGSC0003DMP400054268 1485 494 AT1G34190.1 ANAC017 292 4.00e−79
StNAC037 StNAC037 PGSC0003DMP400054262 chr04 762 253 Proximal AT5G04410.1 ANAC078, NAC2 65 4.00e−11
StNAC038 StNAC038 PGSC0003DMP400054263 chr04 546 181 Proximal AT5G04410.1/AT4G35580.1 ANAC078, NAC2, NTL9 62 2.00e−10
StNAC039 StNAC039 PGSC0003DMP400043482 chr04 756 251 Proximal AT5G18270.2 ANAC087 62 5.00e−10
StNAC040 StNAC040 PGSC0003DMP400043483 chr04 780 259 Tandem AT5G04410.1 ANAC078, NAC2 64 1.00e−10
StNAC041 StNAC041 PGSC0003DMP400043484 chr04 774 257 Tandem AT5G04410.1 ANAC078, NAC2 61 7.00e−10
StNAC042 StNAC042 PGSC0003DMP400013984 chr04 819 272 Dispersed AT1G52890.1 ANAC019 91 8.00e−19
StNAC043 StNAC043.1 PGSC0003DMP400048436 chr04 1128 375 Dispersed AT2G24430.1/AT2G24430.2 ANAC038/ANAC039 52 1.00e−06
StNAC043.2 PGSC0003DMP400048437 1128 375 AT2G24430.2 ANAC039 49 4.00e−06
StNAC043.3 PGSC0003DMP400048438 978 325 AT5G07680.2 ANAC080 48 1.00e−05
StNAC044 StNAC044 PGSC0003DMP400017509 chr04 1068 355 Dispersed AT1G76420.1 ANAC031, CUC3 294 5.00e−80
StNAC045 StNAC045 PGSC0003DMP400001544 chr05 1308 435 Tandem AT1G25580.1 ANAC008 480 e−136
StNAC046 StNAC046 PGSC0003DMP400054481 chr05 1164 387 Dispersed AT1G26870.1 ANAC009 315 4.00e−86
StNAC047 StNAC047 PGSC0003DMP400029528 chr05 1398 465 Dispersed AT4G29230.1 ANAC075 424 e−119
StNAC048 StNAC048 PGSC0003DMP400002220 chr05 849 282 Dispersed AT2G43000.1 ANAC042 255 3.00e−68
StNAC049 StNAC049 PGSC0003DMP400040416 chr05 1176 391 Proximal AT3G10480.1 ANAC050 286 2.00e−77
StNAC050 StNAC050.1 PGSC0003DMP400040418 chr05 495 164 Tandem AT5G04410.1 ANAC078, NAC2 244 2.00e−65
StNAC050.2 PGSC0003DMP400040419 1608 535 AT3G10500.1 ANAC053 384 e−106
StNAC050.3 PGSC0003DMP400040420 1464 487 AT3G10500.1 ANAC053 300 2.00e−81
StNAC051 StNAC051 PGSC0003DMP400044233 chr06 849 282 Dispersed AT4G28530.1 ANAC074 266 2.00e−71
StNAC052 StNAC052 PGSC0003DMP400037408 chr06 447 148 Dispersed AT1G12260.1 ANAC007, VND4 253 4.00e−68
StNAC053 StNAC053 PGSC0003DMP400030689 chr06 891 296 AT1G01720.1 ANAC002, ATAF1 386 e−107
StNAC054 StNAC054 PGSC0003DMP400003753 chr06 171 56 Segmental AT1G65910.1/AT3G03200.1 ANAC028/ANAC045 67 2.00e−12
StNAC055 StNAC055 PGSC0003DMP400045251 chr06 990 329 Dispersed AT1G71930.1 ANAC030, VND7 300 9.00e−82
StNAC056 StNAC056 PGSC0003DMP400062271 chr06 1566 521 Dispersed AT3G15500.1 ANAC055, ATNAC3 49 6.00e−06
StNAC057 StNAC057 PGSC0003DMP400050122 chr06 918 305 Dispersed AT3G18400.1 ANAC058 276 1.00e−74
StNAC058 StNAC058.1 PGSC0003DMP400055799 chr06 642 213 Segmental AT5G61430.1 ANAC100, ATNAC5 286 6.00e−78
StNAC058.2 PGSC0003DMP400055800 813 270 Segmental AT5G61430.1 ANAC100, ATNAC5 254 4.00e−68
StNAC058.3 PGSC0003DMP400055801 1011 336 AT5G61430.1 ANAC100, ATNAC5 362 e−100
StNAC059 StNAC059 PGSC0003DMP400046923 chr06 1893 630 Segmental AT3G49530.1 ANAC062 269 4.00e−72
StNAC060 StNAC060 PGSC0003DMP400058755 chr06 486 161 Dispersed AT1G77450.1 ANAC032 84 6.00e−17
StNAC061 StNAC061 PGSC0003DMP400010437 chr06 1227 408 Segmental AT5G22290.1 ANAC089 241 8.00e−64
StNAC062 StNAC062 PGSC0003DMP400012636 chr06 351 116 Dispersed AT1G65910.1 ANAC028 187 2.00e−48
StNAC063 StNAC063 PGSC0003DMP400034966 chr06 855 284 Dispersed AT4G28530.1 ANAC074 257 8.00e−69
StNAC064 StNAC064 PGSC0003DMP400032661 chr07 1470 489 Dispersed AT3G15500.1 ANAC055, ATNAC3 174 2.00e−43
StNAC065 StNAC065 PGSC0003DMP400068365 chr07 549 182 Tandem AT1G79580.2/AT1G79580.3 ANAC033 60 6.00e−10
StNAC066 StNAC066 PGSC0003DMP400016573 chr07 567 188 Tandem AT3G04060.1 ANAC046 59 3.00e−09
StNAC067 StNAC067 PGSC0003DMP400016578 chr07 819 272 Segmental AT4G28500.1 ANAC073 320 1.00e−87
StNAC068 StNAC068 PGSC0003DMP400060971 chr07 516 171 Tandem AT4G01540.1/AT4G01540.2 ANAC068 60 7.00e−10
StNAC069 StNAC069 PGSC0003DMP400021925 chr07 864 287 Dispersed AT5G53950.1 ANAC098, CUC2 211 3.00e−55
StNAC070 StNAC070 PGSC0003DMP400012529 chr07 615 204 Dispersed AT1G77450.1 ANAC032 86 1.00e−17
StNAC071 StNAC071 PGSC0003DMP400033522 chr07 1020 339 AT3G15510.1 ANAC056, ATNAC2 306 2.00e−83
StNAC072 StNAC072.1 PGSC0003DMP400033523 chr07 1071 356 Tandem AT4G27410.2 ANAC072, RD26 363 e−100
StNAC072.2 PGSC0003DMP400033524 486 161 Tandem AT3G15500.1 ANAC055, ATNAC3 293 4.00e−80
StNAC073 StNAC073 PGSC0003DMP400062002 chr07 855 284 Dispersed AT2G43000.1 ANAC042 261 4.00e−70
StNAC074 StNAC074 PGSC0003DMP400038263 chr07 1050 349 Dispersed AT1G56010.2 ANAC022, NAC1 321 5.00e−88
StNAC075 StNAC075 PGSC0003DMP400035655 chr08 402 133 Segmental AT4G17980.1 ANAC071 69 6.00e−13
StNAC076 StNAC076 PGSC0003DMP400026135 chr08 987 328 Segmental AT2G24430.2/AT2G24430.1 ANAC038, ANAC039 288 5.00e−78
StNAC077 StNAC077.1 PGSC0003DMP400010296 chr08 1032 343 Segmental AT2G46770.1 ANAC043, NST1 278 5.00e−75
StNAC077.2 PGSC0003DMP400010297 1047 348 AT2G46770.1 ANAC043, NST1 300 8.00e−82
StNAC078 StNAC078 PGSC0003DMP400051536 chr08 1047 348 Segmental AT2G24430.2/AT2G24430.1 ANAC038, ANAC039 284 6.00e−77
StNAC079 StNAC079 PGSC0003DMP400046613 chr08 576 191 Proximal AT3G44350.2 ANAC061 35 0.024
StNAC080 StNAC080 PGSC0003DMP400046617 chr08 585 194 Proximal AT5G64060.1 ANAC103 39 0.003
StNAC081 StNAC081.1 PGSC0003DMP400030569 chr08 1002 333 Dispersed AT4G17980.1 ANAC071 283 1.00e−76
StNAC081.2 PGSC0003DMP400030570 780 259 AT4G17980.1 ANAC071 275 2.00e−74
StNAC082 StNAC082 PGSC0003DMP400008400 chr08 897 298 Dispersed AT1G62700.1 ANAC026, VND5 280 9.00e−76
StNAC083 StNAC083 PGSC0003DMP400021401 chr08 1113 370 Segmental AT2G46770.1 ANAC043, NST1 304 6.00e−83
StNAC084 StNAC084 PGSC0003DMP400006960 chr09 633 210 Dispersed AT5G09330.1 ANAC082 3.80E+01 0.005
StNAC085 StNAC085 PGSC0003DMP400018183 chr09 834 277 Dispersed AT4G28530.1 ANAC074 275 3.00e−74
StNAC086 StNAC086.1 PGSC0003DMP400006339 chr09 468 155 Dispersed AT2G18060.1 ANAC037, VND1 291 1.00e−79
StNAC086.2 PGSC0003DMP400006341 1044 347 AT2G18060.1 ANAC037, VND1 415 e−116
StNAC87 StNAC87 PGSC0003DMP400019955 chr10 942 313 Dispersed AT2G46770.1 ANAC043, NST1 310 9.00e−85
StNAC88 StNAC88 PGSC0003DMP400043440 chr10 1056 351 Segmental AT3G15510.1 ANAC056, ATNAC2 310 8.00e−85
StNAC089 StNAC089 PGSC0003DMP400009699 chr10 591 196 Dispersed AT5G64530.1 ANAC104, XND1 193 6.00e−50
StNAC090 StNAC090 PGSC0003DMP400019203 chr10 870 289 AT2G17040.1 ANAC036 300 6.00e−82
StNAC091 StNAC091 PGSC0003DMP400014381 chr10 1077 358 Tandem AT1G01720.1 ANAC002, ATAF1 62 4.00e−10
StNAC092 StNAC092 PGSC0003DMP400014380 chr10 702 233 Tandem AT5G04410.1 ANAC078, NAC2 40 0.001
StNAC093 StNAC093 PGSC0003DMP400014332 chr10 906 301 Proximal AT5G04410.1 ANAC078, NAC2 42 5.00e−04
StNAC094 StNAC094.1 PGSC0003DMP400049938 chr11 1578 525 Tandem AT5G64060.1 ANAC103 242 5.00e−64
StNAC094.2 PGSC0003DMP400049939 1629 542 AT5G64060.1 ANAC103 244 1.00e−64
StNAC094.3 PGSC0003DMP400049940 1629 542 AT5G09330.3/AT5G09330.4 ANAC082 257 1.00e−68
StNAC095 StNAC095 PGSC0003DMP400054120 chr11 1203 400 Tandem AT3G10480.2 ANAC050 290 8.00e−79
StNAC096 StNAC096 PGSC0003DMP400054118 chr11 1632 543 Tandem AT5G04410.1 ANAC078, NAC2 394 e−109
StNAC097 StNAC097.1 PGSC0003DMP400016315 chr11 573 190 Dispersed AT1G01720.1 ANAC002, ATAF1 190 4.00e−49
StNAC097.2 PGSC0003DMP400016316 453 150 AT1G01720.1 ANAC002, ATAF1 271 1.00e−73
StNAC097.3 PGSC0003DMP400016317 876 291 AT1G01720.1 ANAC002, ATAF1 387 e−108
StNAC098 StNAC098 PGSC0003DMP400001684 chr11 951 316 Dispersed AT1G71930.1 ANAC030, VND7 298 3.00e−81
StNAC099 StNAC099.1 PGSC0003DMP400034078 chr11 1293 430 Segmental AT2G27300.1 ANAC040, NTL8 239 2.00e−63
StNAC099.2 PGSC0003DMP400034080 1236 411 AT2G27300.1 ANAC040, NTL8 238 6.00e−63
StNAC100 StNAC100 PGSC0003DMP400045708 chr11 786 261 Tandem AT5G22380.1 ANAC090 247 6.00e−66
StNAC101 StNAC101 PGSC0003DMP400026903 chr12 1056 351 Tandem AT4G27410.2 ANAC072, RD26 355 2.00e−98
StNAC102 StNAC102 PGSC0003DMP400017075 chr12 975 324 Dispersed AT1G79580.3/AT1G79580.2 ANAC033 307 5.00e−84
StNAC103 StNAC103 PGSC0003DMP400009522 chr12 1008 335 Dispersed AT3G18400.1 ANAC058 281 6.00e−76
StNAC104 StNAC104 PGSC0003DMP400027999 chr12 474 157 Dispersed AT3G04060.1 ANAC046 82 2.00e−16
StNAC105 StNAC105.1 PGSC0003DMP400029635 chr12 1761 586 Segmental AT1G34190.1 ANAC017 358 5.00e−99
StNAC105.2 PGSC0003DMP400029636 1440 479 AT1G34190.1 ANAC017 300 2.00e−81
StNAC106 StNAC106 PGSC0003DMP400021076 801 266 AT5G13180.1 ANAC083 255 3.00e−68
StNAC107 StNAC107 PGSC0003DMP400064998 534 177 AT3G15500.1 ANAC055, ATNAC3 52 2.00e−07
StNAC108 StNAC108 PGSC0003DMP400007702 783 260 AT5G13180.1 ANAC083 216 2.00e−56
StNAC109 StNAC109 PGSC0003DMP400065497 894 297 AT1G77450.1 ANAC032 191 5.00e−49
StNAC110 StNAC110 PGSC0003DMP400033187 753 250 AT2G43000.1 ANAC042 180 7.00e−46