Table 3. Comparison of two A. tumefaciens RNA-seq studies.
Number of ncRNAs | ||||||
Category | Wilms et al. [51] | Our study | Commonb | Grand total | ||
Total | Uniquea | Total | Uniquea | |||
sRNA | 149c | 113 | 101 | 66d | 36 | 215 |
asRNA | 76 | 32 | 354 | 310 | 44 | 386 |
5′ UTR leader | 3c | 0 | 20 | 17 | 3 | 20 |
Total | 228 | 145 | 475 | 393 | 83 | 621 |
Unique ncRNAs were identified by one study but not by the other study.
Common ncRNAs were identified by both RNA-seq studies.
Three sRNA identified by Wilms et al. [51] were found to be 5′ UTR leaders in our study.
One sRNA identified by our study overlaps with two sRNAs identified by Wilms et al. [51].