Table 1. Classification and general features of A. finegoldii AHN2437T according to the MIGS recommendations [24].
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Domain: Bacteria | TAS [25] | ||
Phylum Bacteroidetes | TAS [12,26] | ||
Class Bacteroidia | TAS [12,27] | ||
Current classification | Order Bacteroidales | TAS [12,28] | |
Family Rikenellaceae | TAS [11,12] | ||
Genus Alistipes | TAS [1,2] | ||
Species Alistipes finegoldii | TAS [1,2] | ||
MIGS-12 | Reference for biomaterial | Rautio et al., 2003 | TAS [1] |
MIGS-7 | Subspecific genetic lineage (strain) | AHN2437T | TAS [1] |
Gram stain | negative | TAS [1] | |
Cell shape | rod-shaped | TAS [1] | |
Motility | non-motile | TAS [1] | |
Sporulation | non-sporulating | TAS [1] | |
Temperature range | mesophile | TAS [1] | |
Optimum temperature | 37°C | TAS [1] | |
Salinity | not reported | ||
MIGS-22 | Relationship to oxygen | strictly anaerobe | TAS [1] |
Carbon source | not reported | ||
Energy metabolism | chemoorganotroph | TAS [1] | |
MIGS-6 | Habitat | probably human gut | TAS [1] |
MIGS-6.2 | pH | not reported | |
MIGS-15 | Biotic relationship | unknown | |
MIGS-14 | Known pathogenicity | none | TAS [1] |
MIGS-16 | Specific host | Homo sapiens | TAS [1] |
MIGS-18 | Health status of Host | unknown | |
Biosafety level | 1 | TAS [29] | |
MIGS-19 | Trophic level | unknown | |
MIGS-23.1 | Isolation | human appendix tissue | TAS [1] |
MIGS-4 | Geographic location | Helsinki, Finland | TAS [1] |
MIGS-5 | Time of sample collection | 1988 | NAS |
MIGS-4.1 | Latitude | not reported | |
MIGS-4.2 | Longitude | not reported | |
MIGS-4.3 | Depth | not reported | |
MIGS-4.4 | Altitude | not reported |
Evidence codes: TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [30].