Table 3. Nucleotide identity of 11 genome segments of the G10P[14] rotavirus strain V585, Northern Territory, Australia*.
| Gene encoding | Genotype of V585 | Cutoff value† | Identity of V585 against indicated strains |
|
|---|---|---|---|---|
| Genotype reference strain | GenBank strains‡ | |||
| VP1 | R2 | 83 | 85.6 (DS-1) | 96.9 (GirRV) |
| VP2 | C2 | 84 | 84.9 (DS-1) | 89.5 (B12) |
| VP3 | M2 | 81 | 85.1 (DS-1) | 88.9 (MG6) |
| VP4 | P[14] | 80 | 87.4 (A64) | 88.9 (B10925) |
| VP6 | I2 | 85 | 86.6 (DS-1) | 93.8 (RotaTeq BrB-9/SC2-9/W17-9) |
| VP7 | G10 | 80 | 86.8 (A64) | 92.5 (RVL-Bov3) |
| NSP1 | A11 | 79 | 79.9 (Hun5) | 80.2 (BP1879) |
| NSP2 | N2 | 85 | 87.4 (DS-1) | 94.3 (B12) |
| NSP3 | T6 | 85 | 92.4 (WC3) | 94.0 (GirRV/A64) |
| NSP4 | E2 | 85 | 88.7 (DS-1) | 90.8 (Azuk-1) |
| NSP5 | H3 | 91 | 92.9 (AU-1) | 94.1 (RUBV81/Egy3399) |
*VP, viral structural protein; NSP, nonstructural protein. †Numeric values are given as percentage nucleotide identity. Percentage nucleotide cutoff values, genotype designation, and genotype reference strains proposed in (2). ‡Strains that shared the highest nucleotide identity with the Australian G10P[14] strain V585.