Table 8. Individual and profiled gene expression effects on DFS.
N patients | Median (mo) | SD | 95% CI, low | 95% CI, high | Log-rank p | Gene expression in the good prognosis signature (30-gene predictor) | Concordance (trend) with the 30-gene predictor pattern | |
ACE2 | 159 | 0.070 | Up-regulated | YES | ||||
low | 71 | 56.52 | 23.23 | 10.99 | 102.06 | |||
high | 88 | 97.87 | 7.36 | 83.44 | 112.30 | |||
DHTKD1 | 171 | 0.436 | Up-regulated | NO | ||||
low | 85 | 94.46 | 15.75 | 63.60 | 125.32 | |||
high | 86 | 83.77 | 11.86 | 60.52 | 107.02 | |||
FLOT1 | 178 | 0.068 | Down-regulated | YES | ||||
low | 89 | 100.30 | 12.55 | 75.69 | 124.90 | |||
high | 89 | 80.46 | 26.01 | 29.48 | 131.44 | |||
MAP4K1 | 169 | 0.252 | Up-regulated | YES | ||||
low | 86 | 74.11 | 23.75 | 27.55 | 120.67 | |||
high | 83 | 91.80 | 9.12 | 73.92 | 109.69 | |||
NEK2 | 156 | 0.366 | Down-regulated | YES | ||||
low | 78 | 94.43 | 7.48 | 79.76 | 109.10 | |||
high | 78 | 69.15 | 18.68 | 32.53 | 105.76 | |||
PRKD1 | 162 | 0.012 | Down-regulated | YES | ||||
low | 81 | 94.46 | 7.75 | 79.28 | 109.64 | |||
high | 81 | 69.15 | 27.42 | 15.41 | 122.89 | |||
SFRS8 | 184 | 0.400 | Up-regulated | NO | ||||
low | 92 | 91.15 | 17.82 | 56.21 | 126.08 | |||
high | 92 | 87.34 | 11.77 | 64.27 | 110.41 | |||
TBC1D | 165 | 0.193 | Up-regulated | NO | ||||
low | 82 | 91.15 | 15.67 | 60.44 | 121.85 | |||
high | 82 | 74.11 | 13.92 | 46.82 | 101.40 | |||
TGOLN2 | 183 | 0.360 | Down-regulated | YES | ||||
low | 91 | 91.15 | 15.07 | 61.61 | 120.69 | |||
high | 92 | 82.82 | 20.67 | 42.30 | 123.34 | |||
YTHDC2 | 176 | 0.149 | Up-regulated | NO | ||||
low | 88 | 97.87 | 15.64 | 67.22 | 128.51 | |||
high | 88 | 80.46 | 19.87 | 41.51 | 119.41 | |||
ACE2/FLOT1/PRKD1 | 149 | 0.009 | N/A | |||||
intermediate profile | 108 (72.5%) | 83.77 | 15.32 | 53.75 | 113.79 | |||
high/low/low | 20 | 141.84 | 49.20 | 45.41 | 238.26 | YES, good prognosis | ||
low/high/high | 21 | 13.93 | 8.33 | 0.00 | 30.26 | YES, bad prognosis | ||
FLOT1/PRKD1 | 161 | 0.006 | N/A | |||||
intermediate profile | 78 (48.4%) | 91.15 | 6.51 | 78.38 | 103.91 | |||
low/low | 42 | 141.84 | 65.83 | 12.81 | 270.86 | YES, good prognosis | ||
high/high | 41 | 46.75 | 30.24 | 0.00 | 106.03 | YES, bad prognosis | ||
ACE2/PRKD1 | 149 | 0.005 | N/A | |||||
intermediate profile | 72 (48.3%) | 87.34 | 16.82 | 54.38 | 120.31 | |||
high/low | 36 | 141.84 | 26.43 | 90.03 | 193.65 | YES, good prognosis | ||
low/high | 41 | 18.79 | 4.13 | 10.68 | 26.89 | YES, bad prognosis |
N/A, non-applicable.
Significant p values are shown in bold.