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. 2013 Jun 14;62(5):707–724. doi: 10.1093/sysbio/syt033

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© The Author(s) 2013. Published by Oxford University Press, on behalf of the Society of Systematic Biologists.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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The estimated scaling parameters for a) the diversification branching process and b) the coalescence branching process across each combination of simulation type (B to H) and effective population size, using the single-threshold method. The horizontal dashed line indicates a value of 1, which is expected under the default model assumed in simulation B of a constant-rate diversification process and a neutral coalescent process with no substructure and constant population sizes. The multiple-threshold results are in Fig. S3 and follow similar patterns across simulations.