Table 2. A summary of gene length, exon number, exon length and intron length of the PME, proPME, and PMEI in representative species.
Species | Average Gene Length |
Average Exons per Gene |
Average Exon Length |
Average Intron Lengtha
|
||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PME | proPME | PMEI | PME | proPME | PMEI | PME | proPME | PMEI | PME | proPME | ||||
P . patens | 2330 | 2692 | - | 4.28 | 3.23 | - | 273 | 546 | - | 666 | 688 | |||
S . moellendorffii | 1284 | 2300 | - | 4.41 | 3 | - | 217 | 579 | - | 413 | 338 | |||
A . trichopoda | 3159 | 2860 | 562 | 3.73 | 1.87 | 1.06 | 213 | 658 | 517 | 1027 | 2122 | |||
S. bicolor | 1794 | 2917 | 878 | 3.35 | 2.05 | 1.16 | 327 | 872 | 561 | 667 | 2122 | |||
O. sativa | 2623 | 3065 | 938 | 3.47 | 1.89 | 1.12 | 322 | 958 | 559 | 868 | 1709 | |||
S . lycopersicum | 2683 | 3145 | 686 | 4 | 2.58 | 1.13 | 257 | 665 | 507 | 524 | 612 | |||
V. vinifera | 2576 | 3052 | 960 | 4.94 | 2.93 | 1.33 | 248 | 434 | 562 | 558 | 1124 | |||
P . trichocarpa | 2550 | 2654 | 885 | 4.63 | 2.25 | 1.09 | 228 | 747 | 556 | 454 | 1355 | |||
C. papaya | 2600 | 2896 | 851 | 4.74 | 3.07 | 1.15 | 246 | 349 | 616 | 618 | 691 | |||
A. thaliana | 1933 | 2476 | 817 | 4.67 | 2.67 | 1.25 | 227 | 648 | 470 | 429 | 942 | |||
Mean Valueb | 2353 | 2805 | 822 | 4.22 | 2.55 | 1.16 | 255 | 645 | 543 | 622 | 1170 |
a The intron length of the PMEI genes were not shown because many of them do not have introns.
b The mean values of the gene length, exon number, exon length and intron length in the 10 species.
Indicated only one PMEI gene was detected in P . patens and S . moellendorffii , and the structural information was not shown here.