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. 2013 Aug 12;8(8):e71211. doi: 10.1371/journal.pone.0071211

Table 3. Colorectal adenoma SNP associations among the entire population and stratified by race/ethnicity.

Gene SNP All combined Non-Hispanic White African-American Hispanic Asian-Pacific Islander Phet e
NEIL2 rs11785481 0.131
Ca/Coa 666/692 354/364 121/109 116/140 75/79
OR b 0.70 0.64 0.60 1.29 0.25
95%CI 0.55–0.90 0.48–0.87 0.24–1.53 0.72–2.31 0.05–1.37
pc 0.006 0.004 0.286 0.387 0.111
pACT d 0.139 0.089 1.000 1.000 0.806
FEN1 rs108499 0.024
Ca/Coa 691/663 353/365 122/109 113/140 75/77
OR b 1.06 0.95 0.67 1.09 2.12
95%CI 0.90–1.25 0.76–1.18 0.37–1.21 0.76–1.57 1.30–3.45
pc 0.516 0.635 0.185 0.641 0.002
pACT d 1.000 1.000 0.645 1.000 0.009
APEX1 rs17111750 0.004
Ca/Coa 695/664 354/367 121/110 114/140 75/78
OR b 1.00 0.88 2.19 0.78 1.04
95%CI 0.85–1.18 0.71–1.10 1.36–3.55 0.52–1.15 0.58–1.86
pc 0.981 0.271 0.001 0.208 0.897
pACT d 1.000 0.781 0.013 0.573 1.000
FEN1 rs509360 697/665 0.052
Ca/Coa 697/665 353/367 122/111 116/140 74/79
OR b 0.93 0.95 1.27 1.09 0.49
95%CI 0.78–1.09 0.76–1.19 0.81–2.01 0.71–1.68 0.30–0.79
pc 0.358 0.662 0.302 0.694 0.003
pACT d 0.888 1.000 0.746 1.000 0.011
NTHL1 rs2516781 0.062
Ca/Coa 688/664 353/363 122/108 115/140 74/77
OR b 0.91 1.01 0.83 1.06 0.45
95%CI 0.77–1.08 0.80–1.27 0.51–1.34 0.74–1.52 0.25–0.80
pc 0.271 0.960 0.445 0.747 0.006
pACT d 0.840 1.000 0.960 1.000 0.033
a

Excludes 21 individuals who characterized their race/ethnic group as "other";

b

Per-allele ORs and 95%confidence intervals computed using logistic regression assuming a log-additive model and adjusting for age, exam date, sex, clinic, study phase and race among all study participants;

c

Crude p-value;

d

Crude p-value corrected for multiple comparisons using PACT;

e

Race/ethnicity specific per-allele ORs and 95% confidence intervals computed using logistic regression assuming a log-additive model and adjusting for the matching factors age, exam date, sex, clinic, study phase; e p-value for heterogeneity by race.