Table 2. Genes and gene families enriched in SNP deserts.
Genes in | χ2-test | Status | |||
---|---|---|---|---|---|
Gene category |
Genome |
SNP desert |
Pearson’s value |
P-value |
|
Total number of genes | 41,660 | 9,036 | NA | NA | NA |
LEA gene family | 84 | 21 | 0.339 | 0.5606 | – |
NBS gene family* | 144 | 35 | 0.364 | 0.5463 | – |
Energy- and sugar-related genes† | 390 | 124 | 13.753 | 0.0002 | Enriched |
LEA, late embryogenesis abundant, NA, not applicable; SNP, single-nucleotide polymorphism.
*Detail is shown at Supplementary Note 4.
†Detail is shown at Supplementary Note 5.