. Author manuscript; available in PMC: 2013 Aug 13.

Published in final edited form as: Infect Genet Evol. 2010 Aug 5;10(8):1282–1285. doi: 10.1016/j.meegid.2010.07.021

Table 4. Phylogenetically Informative SNP Sites.

Key SNP sites at which the topology is assigned for each set of strains are listed. Bases associated with each site are reported within parentheses. Sets 1 and 2 list radial SNPs only. Sets 3 and 4 list key linear SNPs only.

Sets	Strains	Sites at Which SNPs Assign Topology
1	86-17, 87-07	3798(G), 79307(T), 571478(A), 1492372(A), 1894260(A), 2388580(C), 2984974(C), 4007883(T), 4678681(G), 5153038(C), 5286625(G), 5391618(C)
2	86-24, 86-28, 87-23	3798(T), 79307(A), 571478(G), 1492372(G), 1894260(A), 2388580(T), 2984974(A), 4007883(C), 4678681(A), 5153038(T), 5286625(C), 5391618(A)
3	EK28	358636(A), 421747(C), 2030050(G), 4962486(C), 5303294(C)
4	EK15, U39	5303294(C)