Table 1. Gene pairs identified by whole genome analysis.
Pairs correspond to those presented in Figure 1. Annotation was obtained from the H99 genome database hosted by the Broad Institute.
| Pair | CNAG | Gene 1 | CNAG | Gene 2 |
|---|---|---|---|---|
| 1 | 07406 | Alpha pheromone | 07407 | Fungal mating-type pheromone |
| 2 | 07042 | CHP | 07894 | CHO |
| 3 | 06978 | Cytoplasmic protein | 05657 | - |
| 4 | 06854 | PP | 07916 | PP |
| 5 | 06832 | Glucosidase | 06835 | glucosidase |
| 6 | 06805 | PP | 07828 | PP |
| 7 | 06802 | CHP | 07784 | CHP |
| 8 | 06801 | CHP | 07000 | CHP |
| 9 | 06748 | U3 sno-RNP-associated protein Utp7 | 07466 | WD repeat-containing protein 46 |
| 10 | 06536 | Monocarboxylic acid transporter | 06537 | Monocarboxylic acid transporter |
| 11 | 06338 | ABC transporter PMR5 | 06348 | ABC transporter PMR5 |
| 12 | 06134 | CHP | 00871 | - |
| 13 | 06101 | Eukaryotic ADP/ATP carrier | 06102 | Eukaryotic ADP/ATP carrier |
| 14 | 06026 | Aspartate transaminase | 06088 | Aspartate transaminase |
| 15 | 06010 | Fatty aldehyde dehydrogenase | 06018 | aldehyde dehydrogenase |
| 16 | 05992 | CHP | 07831 | PP |
| 17 | 05990 | PP | 07832 | PP |
| 18 | 05938 | CHP | 07501 | HP |
| 19 | 05914 | MFS maltose permease | 05929 | MFS maltose permease |
| 20 | 05832 | PP | 05833 | Allantoate transporter |
| 21 | 05817 | Nucleotide-sugar transporter | 03426 | - |
| 22 | 05668 | PP | 07396 | PP |
| 23 | 05450 | CHP | 05454 | CHP |
| 24 | 05448 | PP | 05455 | Euk translation initiation factor 1A |
| 25 | 05426 | PP | 07574 | PP |
| 26 | 05348 | CDC42 | 05968 | CDC420 |
| 27 | 05339 | CHP | 07785 | PP |
| 28 | 05327 | PP | 05989 | PP |
| 29 | 05325 | CHP | 05991 | Glycosyl hydrolase family 88 |
| 30 | 05263 | PP | 07425 | CHP |
| 31 | 05254 | UDP-galactose transporter | 07823 | PP |
| 32 | 04828 | Histone | 06745 | Histone H3 |
| 33 | 04794 | Spermine | 06119 | - |
| 34 | 04783 | Monosaccharide transporter | 04784 | Monosaccharide transporter |
| 35 | 04652 | Enoyl reductase | 06759 | Dehydrogenase |
| 36 | 04594 | Pro1 protein | 04618 | Pro1 protein |
| 37 | 04541 | Polyadenylation factor 64 kDa subunit | 04557 | PP |
| 38 | 04540 | ER receptor | 04556 | ER receptor |
| 39 | 04374 | CHP | 04394 | CHP |
| 40 | 03948 | Cytoplasmic protein | 03936 | - |
| 41 | 03904 | Endo-peptidase | 06333 | DNA replication factor |
| 42 | 03732 | Integral membrane protein | 03764 | Integral membrane protein |
| 43 | 03713 | Efflux protein EncT | 03719 | CHP |
| 44 | 03621 | Cyclophilin A | 03627 | Cyclophilin A |
| 45 | 03604 | No arches protein | 00520 | - |
| 46 | 03464 | LAC2 | 03465 | LAC1 |
| 47 | 03407 | PP | 03548 | PP |
| 48 | 03277 | Inositol oxidase | 05316 | Inositol oxidase |
| 49 | 03252 | CHP | 05305 | CHP |
| 50 | 03230 | CHP | 03233 | CHP |
| 51 | 03174 | Phosphopantetheinyl transferase | 04341 | - |
| 52 | 03092 | CHP | 07390 | CHP |
| 53 | 03084 | Endoribonuclease L-psp | 06589 | Endoribonuclease L-psp |
| 54 | 03060 | MDR protein | 03061 | MDR protein |
| 55 | 02896 | Hydroxymethylglutaryl-CoA synthase | 03311 | Hydroxymethylglutaryl-CoA synthase |
| 56 | 02883 | Rac1 | 05998 | Rac2 |
| 57 | 02863 | PP | 06672 | Formate dehydrogenase |
| 58 | 02814 | Glycerol-3-phosphate dehydrogenase | 02815 | Glycerol-3-phosphate dehydrogenase |
| 59 | 02798 | CHP | 05906 | CHP |
| 60 | 02752 | Short-chain dehydrogenase | 04926 | CHP |
| 61 | 02733 | Monosaccharide transporter | 07641 | Monosaccharide transporter |
| 62 | 02556 | Phytanoyl-CoA dioxygenase family protein | 04564 | Phytanoyl-CoA dioxygenase family protein |
| 63 | 02539 | amino acid transporter | 07902 | amino acid transporter |
| 64 | 02489 | mannitol-1-phosphate dehydrogenase | 07745 | mannitol-1-phosphate dehydrogenase |
| 65 | 02479 | monosaccharide transporter | 05340 | monosaccharide transporter |
| 66 | 02476 | CHP | 05328 | - |
| 67 | 02463 | CHP | 07386 | CHP |
| 68 | 02048 | Proline dehydrogenase | 02049 | Proline dehydrogenase |
| 69 | 01969 | Zn metalloprotease | 04524 | - |
| 70 | 01953 | CHP | 02299 | CHP |
| 71 | 01952 | Aryl-alcohol dehydrogenase | 02717 | Aryl-alcohol dehydrogenase |
| 72 | 01925 | CHP | 07869 | CHP |
| 73 | 01757 | CHP | 05185 | CHP |
| 74 | 01727 | HSC 70-4 | 01750 | Chaperone |
| 75 | 01648 | Histone H4 | 07807 | Histone H4 |
| 76 | 01635 | DUF1479 domain-containing protein | 04225 | DUF1479 domain-containing protein |
| 77 | 01446 | HP | 03143 | CHP |
| 78 | 01120 | Dihydrolipoyllysine-residue acetyltransferase | 03509 | Pyruvate dehydrogenase protein component |
| 79 | 00919 | Carboxypeptidase D | 01040 | Carboxypeptidase D |
| 80 | 00866 | transketolase | 03040 | transketolase |
| 81 | 00863 | Flavin-containing monooxygenase | 07389 | Flavin-containing monooxygenase |
| 82 | 00849 | PP | 07708 | CHP |
| 83 | 00598 | Nicotinamide mononucleotide permease | 01674 | MFS transporter |
| 84 | 00597 | Amino acid transporter | 07367 | Amino acid transporter |
| 85 | 00575 | Catalase 3 | 04981 | CAT1 |
| 86 | 00372 | Nuclear protein localization | 05757 | CHP |
| 87 | 00370 | Ubiquitin-carboxy extension protein fusion | 01920 | Poly-ubiquitin |
| 88 | 00260 | Transformer-2-beta isoform 3 | 00399 | Transformer-2-beta isoform 3 |
| 89 | 00128 | CHP | 06757 | CHP |
| 90 | 00047 | Kinase | 04108 | Kinase |
| 91 | 00039 | CHP | 02175 | Exo2 |
| 92 | 00036 | Sec14 cytosolic protein | 03153 | Sec14 cytosolic protein |
| 92 | 00005 | TPR domain-containing protein | 02012 | TPR domain-containing protein |
| 92 | 07876 | PP | 07877 | PP |
| 92 | 07532 | CHP | 03329 | - |
CHP = “conserved hypothetical protein”
HP = “hypothetical protein”
PP = “predicted protein”
- = no annotation