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. 2013 Jun 22;12(4):316–327. doi: 10.1093/bfgp/elt017

Table 1:

Comparison of in silico metabolic reconstructions of P. falciparum

Authors (year of publication) Information about the modela
Metabolites Reactions Genes Compartmentsb
Yeh et al. (2004) [14] 525 696
Fatumo et al. (2009) [11] 554 575
Huthmacher et al. (2010) [12] P: 1622 E: 566 P: 1375 E: 437 P: 579 P: c, m, a, n, r, v, g; E: e, c
Plata et al. (2010) [13] 915 1001 366 P: e, c, m, a
Bazzani et al. (2012) [10] P: 1622 H: 1149 P: 1394 H: 2539 P: 579 H: 704 P: c, m, a, n, r, v, g; H: c, r, g, l, m, n, p, b, s

The first two models [11, 14] were built using graph-based approach and the following are constraint-based models [10, 12, 13].

a‘P’ denotes the model of the parasite, ‘E’ human erythrocyte, ‘H’ human hepatocyte.

bAbbreviated names of compartments: e, extracellular space; c, cytosol; m, mitochondrion, a, apicoplast; n, nucleus; v, digestive vacuole; r, endoplasmic reticulum; g, Golgi complex; l, lysosome; p, peroxisome; b, bile canaliculus; s, sinusoidal space.