Table 1:
Authors (year of publication) | Information about the modela |
|||
---|---|---|---|---|
Metabolites | Reactions | Genes | Compartmentsb | |
Yeh et al. (2004) [14] | 525 | 696 | — | — |
Fatumo et al. (2009) [11] | 554 | 575 | — | — |
Huthmacher et al. (2010) [12] | P: 1622 E: 566 | P: 1375 E: 437 | P: 579 | P: c, m, a, n, r, v, g; E: e, c |
Plata et al. (2010) [13] | 915 | 1001 | 366 | P: e, c, m, a |
Bazzani et al. (2012) [10] | P: 1622 H: 1149 | P: 1394 H: 2539 | P: 579 H: 704 | P: c, m, a, n, r, v, g; H: c, r, g, l, m, n, p, b, s |
The first two models [11, 14] were built using graph-based approach and the following are constraint-based models [10, 12, 13].
a‘P’ denotes the model of the parasite, ‘E’ human erythrocyte, ‘H’ human hepatocyte.
bAbbreviated names of compartments: e, extracellular space; c, cytosol; m, mitochondrion, a, apicoplast; n, nucleus; v, digestive vacuole; r, endoplasmic reticulum; g, Golgi complex; l, lysosome; p, peroxisome; b, bile canaliculus; s, sinusoidal space.